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AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hetu32g00957 ATGCATGATTTTTGCTTCACGATCCCGTACGGGATGATAGTGTTCTGTGGTGGGCTTATTGGCTTTGCAAGAAAAGGGAGTACGACGTCGTTGGCTGGTGGTGTGGGCACTGGATTGTTGCTCTTTCTGGCTTCCTATCTCACTCTCAGTGCCTTTCACAAGCGAAAGAACTCGTGGGTCGGGTTGATTCTTGAAACTGTTTGTGCTGCGGCACTCACATGGGTTATGGGACAGCGATACGCAGAAACTGCTAAAATAATGCCTGCAGGTCTTGTTGCCGGTATCAGTGGATTGATGACAGCATTTTATCTGTACAAGATAGCCACCGGTGGTAACCATTTTCCCGCCAAAACTGAATGA 360 48.06 MHDFCFTIPYGMIVFCGGLIGFARKGSTTSLAGGVGTGLLLFLASYLTLSAFHKRKNSWVGLILETVCAAALTWVMGQRYAETAKIMPAGLVAGISGLMTAFYLYKIATGGNHFPAKTE 119
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hetu32g00957 119 Pfam Transmembrane proteins 14C 6 103 IPR005349 GO:0016020(InterPro)
Hetu32g00957 119 PANTHER TRANSMEMBRANE PROTEIN 14, 15 1 108 IPR005349 GO:0009706(PANTHER)|GO:0015245(PANTHER)|GO:0015908(PANTHER)|GO:0016020(InterPro)
Hetu32g00957 119 Gene3D - 1 111 IPR044890 -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hetu32g00957 - -
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Event-related genes

Select Gene_1 Gene_2 Event_name
299230 Hetu31g00902 Hetu32g00957
301060 Hetu32g00957 Hetu33g01009
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Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
3624431 Hetu Hetu31g00902 Hetu-Chr31:40672589 Hetu32g00957 Hetu-Chr32:44420369
3628505 Hetu Hetu32g00957 Hetu-Chr32:44420369 Hetu33g01009 Hetu-Chr33:43132675