AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

leaf

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hetu32g00970 ATGATGAAGATATCAATGTGTTCTATTCACAGGAAGATAGGCGTAGAGTTTGTATGGTTGATATCAGATCAACATCTTCATACACAACACCATGTGGTCTATACCAGTTCGAATGATCGAGAGCCGGTTCCAGCAAGCTGCAACAATGCAGTGTTTCCAAAGTTATCTGCCAGTACTCCTAGAGGATTCCATTCGACTGATTCTGACTCAGATTGTTATGATCCTGTTGTCAGTAGGAAATGCAATGGATCAGATTCGAATTCAAATCTTGGGAAGTTTGATGATCTTCCTCAACATGTAAAGAGAAAGCAAAATGTTTCAAATGCACGGGAAGATTTCCCAAATGCTTATTGTTACTTCTTTCATGATGATCCAAGGATCCAAGAGCTTGTTAGAAGTCGGCTACCTTATTTTTCCCCTTTGGGCAGCATGTTAAACATGGATCTTGAGCAGCCCGGTACATCAAAGATTGATTATATGGGACAATTTAGCTTCGGTGAAAGTTCAAAACAAGCTGCCAGAACTATCACAGACAAGAAAAGTTCAACTAGCAGGAAAGATTTAAGAAAATCAAAAACCGAAGAGATGTCACATGGTTGGGTGAATCCAAAGCTTGGTGTTGATAAAGTGACAACAAAAGGAGCTGCGAAAAGAAAGGTTCATACAGCTCGCCAAAGTGCTGGTCATTGGATAACCGGTTCGGATGGAAAGAGAGTCTATGTTGGTAAAAGCGGCCAGGAGTTGACTGGCCGAGTTGCATACATACAGTACAAAAAGGAGAGTGGATTAGGGTTTAAAAAGGTAAAGAGGAAATCTGTTTCCAAGAAGTAG 831 40.67 MMKISMCSIHRKIGVEFVWLISDQHLHTQHHVVYTSSNDREPVPASCNNAVFPKLSASTPRGFHSTDSDSDCYDPVVSRKCNGSDSNSNLGKFDDLPQHVKRKQNVSNAREDFPNAYCYFFHDDPRIQELVRSRLPYFSPLGSMLNMDLEQPGTSKIDYMGQFSFGESSKQAARTITDKKSSTSRKDLRKSKTEEMSHGWVNPKLGVDKVTTKGAAKRKVHTARQSAGHWITGSDGKRVYVGKSGQELTGRVAYIQYKKESGLGFKKVKRKSVSKK 276
leaf

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hetu32g00970 276 PANTHER RHO GTPASE-ACTIVATING PROTEIN 96 276 - -
Hetu32g00970 276 MobiDBLite consensus disorder prediction 179 196 - -
Hetu32g00970 276 MobiDBLite consensus disorder prediction 170 196 - -
leaf

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hetu32g00970 - -
leaf

Event-related genes

Select Gene_1 Gene_2 Event_name
299236 Hetu31g00911 Hetu32g00970
301065 Hetu32g00970 Hetu33g01020
leaf

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
3366665 Hetu Hetu32g00970 Hetu-Chr32:44676475 Hetu8g01346 Hetu-Chr8:55549360
3544083 Hetu Hetu11g02500 Hetu-Chr11:134225619 Hetu32g00970 Hetu-Chr32:44676475
3547549 Hetu Hetu12g02327 Hetu-Chr12:129398080 Hetu32g00970 Hetu-Chr32:44676475
3624440 Hetu Hetu31g00911 Hetu-Chr31:40896251 Hetu32g00970 Hetu-Chr32:44676475
3628513 Hetu Hetu32g00970 Hetu-Chr32:44676475 Hetu33g01020 Hetu-Chr33:43378260