Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Hetu32g01094 | ATGGAGAGATTCGGAGGCGCTGGTGGTGATACTCTACAACTTGATTCGAATTCATCAGGTGGTGCTGTATTTGATGCGTCACAGTATGCGTTCTTTGGTAATGAAGTGCTTGAAGAAATTGAGTTGGGAGGGCTGGAGGATGACGGAGATCTTTCGGAAGCTAAGTTAGAGGATGATGAGCATCTGTTGGAGCAGGAAGAGGGTGTGTTTCCAGGAATTGACGATCTTTCGACAACATTTTTGAAGCTCAACAAAGATGGCATGGGACCAAGCGTTGGAGGTTTTGGTGACCGAGGATCCAGAGAAACTTCATCTGCAGCTGACTGGGCACAGGGAGGAGACTACACCAACTGGGTGCTAGATCTAGATAATTTCGAAGCAGAAAGGGGTCAACAACAAACCAATAAATGGTCAAACTCTTCGTTTCCTCTTCAAGATCCATCAACGCTTCTTCACAGAACATCATCCTATGAATCAAACCAATATCTTCACAGAACATCATCGTACCCCGAGCAACATCAACAACACAACCTTAACCAGCACCTGATAGATGAATCAAAGAATCTTCATAGAACATCATCTTACCCTGAACAGCAGCAACACCACCACCTTGGTCAGCAGCATTTGCTTTTCTCTAGTGAACCGGTTCCTGTTCCTAAATCATCCTTCATTTCATACCCTCCTCCAGGTGGCGGTGGGTCCCCCCAATTTTCACCAAATCATCAATCACGCTATCTTAACCCTCCGTATCACCCCACTGGACCCCAGGCTGGACCATCGTTTTCCAGTATATCTCCACAGCTTCAGATGGGTGGGGTGCCACATGGATCACCATTTGGCAGTAATTTTAATCTGCCTCAGTTTCGTCCTCCTGCTCCACCTGTCAATAACCGGCTACAAAACCAATTTGGCGGAAATTTGCCTGATCTTTCAAATGGTATGATGCAACAACATTTCACTCACAATAACAGTATACCGCCTCAACAACACAGGATGCACCAACAATTTCAGCCGCCTTTTGGTGGACATTTATCCGGGATGCAGCCGCTAATGAACCAGCATCCACCTCTAATGAACAATTTTGAACCCCTTGGGATTGGTTCAAGAGATTTGAGACCTAAGTCATTGGCCAAAGGTAGACCGGGTCAGGGACCGAGGGGCTTTGACACCAGTGGATGGCCACAGTTCAAATCAAAATACATGACATCTGATGAGATTGAAAATATTCTCAGAATGCAACTTGCCGCTACACACAGTAATGATCCTTATGTAGACGATTACTATCACCAAGCTTGTTTAGCAAACAAATCTAGCGGTGCAAAATTAAGACACCATTTTTGCCCCACCCAATTAAGGGACTGCCCACCCAGAGCCCGTGCTGCTAACGAACCACATGCATTTCTTCAAGTTGATGCTTTGGGCCGGATCTCTTTTTCCTCCATACGACGTCCCCGCCCACTTCTTGAAGTTGACCCACCAAAGTCAACCACTGGTGGGATCACTGATCAGAAATTGTTGGACAAACCTTTGGAACAAGAACCTATGCTTGCAGCTAGAGTCACCATTGAAGACGGTATTTGTCTTCTTCTAGACGTTGATGATATTGATCGTTTTCTACAGTTCAATCAGCTCCAGGATGGTGGGGCCCAGTTACGGCAGAGGCGACAAGTCCTTCTGGAAGGTTTAGCAACGTCGCTTCACCTTGTTGACCCGTTTGGCAAGAACGGTCAAACGGATGAGTCGGCTCAAAAGGACGATTTCATCTTTTTACGGCTGGCTTCTCTTTCAAAGGGACGGAAGCTGATTTCAAGTTATCTCAAACATCTTGAGCCGGGTAGCGAGTTGACTCGTGTGGTTTGCATGACAATTTTCCGCCATTTAAGGTTTTTATTTGGAGTTGTTCCTGTTGATCCACAAGCAGCAGAAACTATTAATAATCTTGTAATTACCGTTTCGTCCTCGGTTCGTGGGATGGAGCTTAGATCACTCGGTACCTGTCTTGCATCTGTTGTTTGTTCTCCAAAGCAGCCCCCACTTCGTCCTGTTGGAAGTCCTGCGGGGGATGGGGCTTCTGTTGTGTTGAAATCTGTACTCGAAAGAGCAACCGAGCTTTTAACCGACCCAAATGCTGCCACGAGCTGCAGCCCAACAAATCGGGCTTTTTGGCAGGCATCTTTTGACGCTTTTTTTGGGCTTCTCACCAAATACTGTGTTGGTAAATATGAAAGCGTTGTCCAGTCGTTGCTGAGTCAGGGGTGTGGTCCATCCGAGACGGCGGTTATGGGGTCAGATGCTGCAAAAGCTATTAGTCGGGAAATGCCCATTGAACTCTTACGGGCCAGCCTTCCTCATACAAACGAAAACCAGAGGAAGGTGTTACTTGATTTTGCTCAACGGTCCATGCCTGTTCATAGCGCTTGA | 2421 | 46.63 | MERFGGAGGDTLQLDSNSSGGAVFDASQYAFFGNEVLEEIELGGLEDDGDLSEAKLEDDEHLLEQEEGVFPGIDDLSTTFLKLNKDGMGPSVGGFGDRGSRETSSAADWAQGGDYTNWVLDLDNFEAERGQQQTNKWSNSSFPLQDPSTLLHRTSSYESNQYLHRTSSYPEQHQQHNLNQHLIDESKNLHRTSSYPEQQQHHHLGQQHLLFSSEPVPVPKSSFISYPPPGGGGSPQFSPNHQSRYLNPPYHPTGPQAGPSFSSISPQLQMGGVPHGSPFGSNFNLPQFRPPAPPVNNRLQNQFGGNLPDLSNGMMQQHFTHNNSIPPQQHRMHQQFQPPFGGHLSGMQPLMNQHPPLMNNFEPLGIGSRDLRPKSLAKGRPGQGPRGFDTSGWPQFKSKYMTSDEIENILRMQLAATHSNDPYVDDYYHQACLANKSSGAKLRHHFCPTQLRDCPPRARAANEPHAFLQVDALGRISFSSIRRPRPLLEVDPPKSTTGGITDQKLLDKPLEQEPMLAARVTIEDGICLLLDVDDIDRFLQFNQLQDGGAQLRQRRQVLLEGLATSLHLVDPFGKNGQTDESAQKDDFIFLRLASLSKGRKLISSYLKHLEPGSELTRVVCMTIFRHLRFLFGVVPVDPQAAETINNLVITVSSSVRGMELRSLGTCLASVVCSPKQPPLRPVGSPAGDGASVVLKSVLERATELLTDPNAATSCSPTNRAFWQASFDAFFGLLTKYCVGKYESVVQSLLSQGCGPSETAVMGSDAAKAISREMPIELLRASLPHTNENQRKVLLDFAQRSMPVHSA | 806 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Hetu32g01094 | 806 | MobiDBLite | consensus disorder prediction | 367 | 395 | - | - | |
| Hetu32g01094 | 806 | PANTHER | TOPOISOMERASE II-ASSOCIATED PROTEIN PAT1 | 17 | 181 | IPR039900 | GO:0000290(PANTHER)|GO:0000290(InterPro)|GO:0000932(PANTHER)|GO:0003723(PANTHER)|GO:0033962(PANTHER) | |
| Hetu32g01094 | 806 | MobiDBLite | consensus disorder prediction | 220 | 260 | - | - | |
| Hetu32g01094 | 806 | MobiDBLite | consensus disorder prediction | 235 | 249 | - | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Hetu32g01094 | K12617 | DNA topoisomerase 2-associated protein PAT1 |
| Select | Gene_1 | Gene_2 | Event_name |
|---|---|---|---|
| 299255 | Hetu31g01058 | Hetu32g01094 | |
| 301083 | Hetu32g01094 | Hetu33g01156 |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Hetu | Hetu-Chr32:51677844 | Hetu33g01156 | Hetu-Chr33:49530648 | dispersed | |
| Hetu | Hetu-Chr32:51633002 | Hetu32g01094 | Hetu-Chr32:51677844 | proximal |