AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hetu32g01094 ATGGAGAGATTCGGAGGCGCTGGTGGTGATACTCTACAACTTGATTCGAATTCATCAGGTGGTGCTGTATTTGATGCGTCACAGTATGCGTTCTTTGGTAATGAAGTGCTTGAAGAAATTGAGTTGGGAGGGCTGGAGGATGACGGAGATCTTTCGGAAGCTAAGTTAGAGGATGATGAGCATCTGTTGGAGCAGGAAGAGGGTGTGTTTCCAGGAATTGACGATCTTTCGACAACATTTTTGAAGCTCAACAAAGATGGCATGGGACCAAGCGTTGGAGGTTTTGGTGACCGAGGATCCAGAGAAACTTCATCTGCAGCTGACTGGGCACAGGGAGGAGACTACACCAACTGGGTGCTAGATCTAGATAATTTCGAAGCAGAAAGGGGTCAACAACAAACCAATAAATGGTCAAACTCTTCGTTTCCTCTTCAAGATCCATCAACGCTTCTTCACAGAACATCATCCTATGAATCAAACCAATATCTTCACAGAACATCATCGTACCCCGAGCAACATCAACAACACAACCTTAACCAGCACCTGATAGATGAATCAAAGAATCTTCATAGAACATCATCTTACCCTGAACAGCAGCAACACCACCACCTTGGTCAGCAGCATTTGCTTTTCTCTAGTGAACCGGTTCCTGTTCCTAAATCATCCTTCATTTCATACCCTCCTCCAGGTGGCGGTGGGTCCCCCCAATTTTCACCAAATCATCAATCACGCTATCTTAACCCTCCGTATCACCCCACTGGACCCCAGGCTGGACCATCGTTTTCCAGTATATCTCCACAGCTTCAGATGGGTGGGGTGCCACATGGATCACCATTTGGCAGTAATTTTAATCTGCCTCAGTTTCGTCCTCCTGCTCCACCTGTCAATAACCGGCTACAAAACCAATTTGGCGGAAATTTGCCTGATCTTTCAAATGGTATGATGCAACAACATTTCACTCACAATAACAGTATACCGCCTCAACAACACAGGATGCACCAACAATTTCAGCCGCCTTTTGGTGGACATTTATCCGGGATGCAGCCGCTAATGAACCAGCATCCACCTCTAATGAACAATTTTGAACCCCTTGGGATTGGTTCAAGAGATTTGAGACCTAAGTCATTGGCCAAAGGTAGACCGGGTCAGGGACCGAGGGGCTTTGACACCAGTGGATGGCCACAGTTCAAATCAAAATACATGACATCTGATGAGATTGAAAATATTCTCAGAATGCAACTTGCCGCTACACACAGTAATGATCCTTATGTAGACGATTACTATCACCAAGCTTGTTTAGCAAACAAATCTAGCGGTGCAAAATTAAGACACCATTTTTGCCCCACCCAATTAAGGGACTGCCCACCCAGAGCCCGTGCTGCTAACGAACCACATGCATTTCTTCAAGTTGATGCTTTGGGCCGGATCTCTTTTTCCTCCATACGACGTCCCCGCCCACTTCTTGAAGTTGACCCACCAAAGTCAACCACTGGTGGGATCACTGATCAGAAATTGTTGGACAAACCTTTGGAACAAGAACCTATGCTTGCAGCTAGAGTCACCATTGAAGACGGTATTTGTCTTCTTCTAGACGTTGATGATATTGATCGTTTTCTACAGTTCAATCAGCTCCAGGATGGTGGGGCCCAGTTACGGCAGAGGCGACAAGTCCTTCTGGAAGGTTTAGCAACGTCGCTTCACCTTGTTGACCCGTTTGGCAAGAACGGTCAAACGGATGAGTCGGCTCAAAAGGACGATTTCATCTTTTTACGGCTGGCTTCTCTTTCAAAGGGACGGAAGCTGATTTCAAGTTATCTCAAACATCTTGAGCCGGGTAGCGAGTTGACTCGTGTGGTTTGCATGACAATTTTCCGCCATTTAAGGTTTTTATTTGGAGTTGTTCCTGTTGATCCACAAGCAGCAGAAACTATTAATAATCTTGTAATTACCGTTTCGTCCTCGGTTCGTGGGATGGAGCTTAGATCACTCGGTACCTGTCTTGCATCTGTTGTTTGTTCTCCAAAGCAGCCCCCACTTCGTCCTGTTGGAAGTCCTGCGGGGGATGGGGCTTCTGTTGTGTTGAAATCTGTACTCGAAAGAGCAACCGAGCTTTTAACCGACCCAAATGCTGCCACGAGCTGCAGCCCAACAAATCGGGCTTTTTGGCAGGCATCTTTTGACGCTTTTTTTGGGCTTCTCACCAAATACTGTGTTGGTAAATATGAAAGCGTTGTCCAGTCGTTGCTGAGTCAGGGGTGTGGTCCATCCGAGACGGCGGTTATGGGGTCAGATGCTGCAAAAGCTATTAGTCGGGAAATGCCCATTGAACTCTTACGGGCCAGCCTTCCTCATACAAACGAAAACCAGAGGAAGGTGTTACTTGATTTTGCTCAACGGTCCATGCCTGTTCATAGCGCTTGA 2421 46.63 MERFGGAGGDTLQLDSNSSGGAVFDASQYAFFGNEVLEEIELGGLEDDGDLSEAKLEDDEHLLEQEEGVFPGIDDLSTTFLKLNKDGMGPSVGGFGDRGSRETSSAADWAQGGDYTNWVLDLDNFEAERGQQQTNKWSNSSFPLQDPSTLLHRTSSYESNQYLHRTSSYPEQHQQHNLNQHLIDESKNLHRTSSYPEQQQHHHLGQQHLLFSSEPVPVPKSSFISYPPPGGGGSPQFSPNHQSRYLNPPYHPTGPQAGPSFSSISPQLQMGGVPHGSPFGSNFNLPQFRPPAPPVNNRLQNQFGGNLPDLSNGMMQQHFTHNNSIPPQQHRMHQQFQPPFGGHLSGMQPLMNQHPPLMNNFEPLGIGSRDLRPKSLAKGRPGQGPRGFDTSGWPQFKSKYMTSDEIENILRMQLAATHSNDPYVDDYYHQACLANKSSGAKLRHHFCPTQLRDCPPRARAANEPHAFLQVDALGRISFSSIRRPRPLLEVDPPKSTTGGITDQKLLDKPLEQEPMLAARVTIEDGICLLLDVDDIDRFLQFNQLQDGGAQLRQRRQVLLEGLATSLHLVDPFGKNGQTDESAQKDDFIFLRLASLSKGRKLISSYLKHLEPGSELTRVVCMTIFRHLRFLFGVVPVDPQAAETINNLVITVSSSVRGMELRSLGTCLASVVCSPKQPPLRPVGSPAGDGASVVLKSVLERATELLTDPNAATSCSPTNRAFWQASFDAFFGLLTKYCVGKYESVVQSLLSQGCGPSETAVMGSDAAKAISREMPIELLRASLPHTNENQRKVLLDFAQRSMPVHSA 806
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hetu32g01094 806 MobiDBLite consensus disorder prediction 367 395 - -
Hetu32g01094 806 PANTHER TOPOISOMERASE II-ASSOCIATED PROTEIN PAT1 17 181 IPR039900 GO:0000290(PANTHER)|GO:0000290(InterPro)|GO:0000932(PANTHER)|GO:0003723(PANTHER)|GO:0033962(PANTHER)
Hetu32g01094 806 MobiDBLite consensus disorder prediction 220 260 - -
Hetu32g01094 806 MobiDBLite consensus disorder prediction 235 249 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hetu32g01094 K12617 DNA topoisomerase 2-associated protein PAT1
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Event-related genes

Select Gene_1 Gene_2 Event_name
299255 Hetu31g01058 Hetu32g01094
301083 Hetu32g01094 Hetu33g01156
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Hetu Hetu-Chr32:51677844 Hetu33g01156 Hetu-Chr33:49530648 dispersed
Hetu Hetu-Chr32:51633002 Hetu32g01094 Hetu-Chr32:51677844 proximal