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AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hetu32g02187 ATGAGCTCATCCAGCCGGTTCCTTAGAGTGCTAACTCAGCTGAAAGGTGAAGCCGGCATTATCTTCAGATCAGACTTGTTGACTGTGGATAATTATGCAGGTTTGTTTGGTGAAATCAGAATGGAAATGCAGATGCCAGCGGTTAAAGCTACACTTTGTCTTGGATCCGAGACGCATTTTATAGAAGCTTGCAAAGGGATTCTTTCGGAACAATTGGTTTTTGTGAAAGGAGAAAGTATGAACATATTGAAGGAGTTTATAACCTCGCATAACGTTCCAATTGATGTCCCTGATGAAGTAACATCTGAAGACGATGATGGTGATGATGAGGCGCCCACTGTCAAGTCAAAGAAGGTTAGAACATAG 366 42.08 MSSSSRFLRVLTQLKGEAGIIFRSDLLTVDNYAGLFGEIRMEMQMPAVKATLCLGSETHFIEACKGILSEQLVFVKGESMNILKEFITSHNVPIDVPDEVTSEDDDGDDEAPTVKSKKVRT 121
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hetu32g02187 121 PANTHER T2E6.7-RELATED 42 120 - -
Hetu32g02187 121 MobiDBLite consensus disorder prediction 95 121 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hetu32g02187 - -
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Event-related genes

Select Gene_1 Gene_2 Event_name
299541 Hetu31g02179 Hetu32g02187
301193 Hetu32g02187 Hetu33g02125
411759 Hetu1g00079 Hetu32g02187
415557 Hetu2g00137 Hetu32g02187
416399 Hetu32g02187 Hetu3g00073
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Hetu Hetu-Chr1:3392148 Hetu32g02187 Hetu-Chr32:126851792 wgd
Hetu Hetu-Chr2:4204829 Hetu32g02187 Hetu-Chr32:126851792 wgd
Hetu Hetu-Chr2:1820891 Hetu32g02187 Hetu-Chr32:126851792 wgd
Hetu Hetu-Chr3:3324387 Hetu32g02187 Hetu-Chr32:126851792 wgd
Hetu Hetu-Chr31:124711922 Hetu32g02187 Hetu-Chr32:126851792 wgd
Hetu Hetu-Chr32:126851792 Hetu33g02125 Hetu-Chr33:119219717 wgd