AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hetu32g02281 ATGGGATACGAAAAAGTTCTTAGCGCTTTACGGGAGATTTTTCCAGAGGTTGATTTGTGTAGGCTGAAAGCTATCTCTTTAGAACATCCTAACGATGCTGATGTGGCTGTGGGAGTAGTTCTTGATCTCCCTAAACGTCCACTTACAATTGGTTCTTCAAGTAATAGTCAGAGCTCCCTCAGGTTTTCTGATGGTAATATTTTTCATGCAGATAATGGCAAAAGGAAAGTTGATTCAAGTATGGATCATGTAGTTGTAAATCCTTGTATCGCTGAACATTCAACTAAAGATCATGTTTCAAGCATGGATGGAAGTTTCCGTGGTGCAACGGGAGCTTTAGATGCTGGTTTTTCTACTCAATATACCCGTAATCCATTTGGGGAGCATCACGCTGGAGAAGTAAATGCGGAGAAAGCCATCTTAGCCACTGAATTGAGAGAGCTTCATGTTCGCTTGAATACTTTGTCGGATGACAGAAACAAATCACTTAAAATTCTTGATGAGATGCATAGAGCGTTAGAGATTAGAATGGCTGCTGCTTTAGAAGAAATCGAAGCAGCAGAAGGCAAAAAGTTAGAACGAGAACGGTCTGCTAGAGAAGCTCTTTTGTACCAAGAAAGCCAAATGGAAAAAGTGGTTGAAGAGTCTAAGAAACTGAAACTAGAAGCTGAGGAAAATTCTAAGTTGCAAGAGTTCCTCACGGATCGTGGCCATGTGATTGATATTCTACAAGGAGAGATGGCTGTCAAATGCCAAGATGTGTTACTGCTAAAAGAGAAGTTTGACAAGCGAATCCCACTATCGCGATCACTCTTTTCTAGCCAAACATCAACAATGTTAGTCTCCCCAAATTCATCTTTCAGGATCAGCACACCACCTTTTGAGCATGAGACAGAGACAGAGACGCATGTGACTCCAAAGAAGAGTTCGGAACATGATGATTTTTATGGTATTCTTGGCAAGATTTCAAGGTTGGACGGATCACCGAGGTCTCCTCATGGAGAAACAAGAAATTCTTCTAGTAACGGTGAAGAAAAAAAGGATGATGACGACGATGAACATAAGGGGCTTTTAGATGATGACGGATGGGAGCTGTTTAACAATGGTGATCTTTTGAACATAAGAAGAGAGGCGTGTTAG 1140 41.23 MGYEKVLSALREIFPEVDLCRLKAISLEHPNDADVAVGVVLDLPKRPLTIGSSSNSQSSLRFSDGNIFHADNGKRKVDSSMDHVVVNPCIAEHSTKDHVSSMDGSFRGATGALDAGFSTQYTRNPFGEHHAGEVNAEKAILATELRELHVRLNTLSDDRNKSLKILDEMHRALEIRMAAALEEIEAAEGKKLERERSAREALLYQESQMEKVVEESKKLKLEAEENSKLQEFLTDRGHVIDILQGEMAVKCQDVLLLKEKFDKRIPLSRSLFSSQTSTMLVSPNSSFRISTPPFEHETETETHVTPKKSSEHDDFYGILGKISRLDGSPRSPHGETRNSSSNGEEKKDDDDDEHKGLLDDDGWELFNNGDLLNIRREAC 379
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hetu32g02281 379 PANTHER OS10G0315400 PROTEIN 1 69 - -
Hetu32g02281 379 Coils Coil 163 190 - -
Hetu32g02281 379 MobiDBLite consensus disorder prediction 294 319 - -
Hetu32g02281 379 MobiDBLite consensus disorder prediction 339 361 - -
Hetu32g02281 379 MobiDBLite consensus disorder prediction 283 361 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hetu32g02281 - -
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Event-related genes

Select Gene_1 Gene_2 Event_name
299570 Hetu31g02256 Hetu32g02281
301220 Hetu32g02281 Hetu33g02214
411782 Hetu1g00207 Hetu32g02281
415579 Hetu2g00247 Hetu32g02281
416407 Hetu32g02281 Hetu3g00197
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Hetu Hetu-Chr1:8264718 Hetu32g02281 Hetu-Chr32:133562326 wgd
Hetu Hetu-Chr2:8799157 Hetu32g02281 Hetu-Chr32:133562326 wgd
Hetu Hetu-Chr3:8151496 Hetu32g02281 Hetu-Chr32:133562326 wgd
Hetu Hetu-Chr31:131560433 Hetu32g02281 Hetu-Chr32:133562326 wgd
Hetu Hetu-Chr32:133562326 Hetu33g02214 Hetu-Chr33:125515708 wgd