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AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hetu33g00593 ATGGCTATAACTATAAGCTATACCCTTGTTCTAATTCCATATTTTCTTCAATCTCATTTTGATATTTCATATGCTTTTAGATGCTTAGATCATACACTCACATCTAAAGGAGTCTACACTTCTTGTAAAGATCTTCCTCATTTATCAGCTCAGCTTTATTGGACCTACAACTCAACCATGGGTGTAGCCGATATTGCATACCGGGCCAGACAAGGGGCCGGTGGTTGGGTTGCGTGGGCCATCAACCCGAACCAAATAGGTATGGTTGGGTCAGAAGCGTTAGTGGCTTTTGTCAACGGTAATGGAAGTGTGACAGTATATCCAACAATGATAACTAGTTACAGCCCGTCGATGCTGCCTTCAGATCTTAACTTCCCTGTTTCGGGCCTTTCGGCTGAGTTTTTGAACAATGAAATCACCATTTATGCGACTGTGGGCCCGTTTGCAAGCGGGTCTGTTGTTAATCAAGTATGGCAAGCTGGGAATTTGGTTTTAGATGGTGTCCCTCAAATGCATGCGGTTTCTCAACAAAATCTTCAATCAACTGGGCAGCTTGATTTCTTGTTTGGTTAA 573 42.76 MAITISYTLVLIPYFLQSHFDISYAFRCLDHTLTSKGVYTSCKDLPHLSAQLYWTYNSTMGVADIAYRARQGAGGWVAWAINPNQIGMVGSEALVAFVNGNGSVTVYPTMITSYSPSMLPSDLNFPVSGLSAEFLNNEITIYATVGPFASGSVVNQVWQAGNLVLDGVPQMHAVSQQNLQSTGQLDFLFG 190
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hetu33g00593 190 CDD DOMON-CIL1-like 39 188 IPR045265 -
Hetu33g00593 190 PANTHER CYTOCHROME B561 AND DOMON DOMAIN-CONTAINING PROTEIN 11 188 - -
Hetu33g00593 190 Pfam Protein of unknown function (DUF568) 88 187 IPR045265 -
Hetu33g00593 190 ProSiteProfiles DOMON domain profile. 48 161 IPR005018 -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hetu33g00593 - -
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Event-related genes

Select Gene_1 Gene_2 Event_name
299923 Hetu31g00447 Hetu33g00593
300928 Hetu32g00499 Hetu33g00593
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Hetu Hetu-Chr31:14887752 Hetu33g00593 Hetu-Chr33:18869712 dispersed
Hetu Hetu-Chr32:19230967 Hetu33g00593 Hetu-Chr33:18869712 dispersed
Hetu Hetu-Chr33:18869712 Hetu29g02502 Hetu-Chr29:156301417 dispersed
Hetu Hetu-Chr33:18866147 Hetu33g00593 Hetu-Chr33:18869712 tandem