Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Hetu33g00594 | ATGCTCCATCACATCCCACTTCCCCAAATTCAAAACATCATGTCTCTGACACCCACTGATCAAGATCAGATCACAAACACAGGTGAACTTCATGTCATTGTGGGCCCAATGTTTGCCGGTAAAACCACTGCCCTTCTTCGCAGGATCAAATCTGAAGCCACCAATGGCAGGAATATAGCAATGATAAAGTCAAACAAGGATACCCGATACGCGATAGATTCGGTTGTGACCCATGATGGAACAAAGTATCCATGTTGGGCACTGCCTGATTTGTTGTCTTTTAAACAGAAGCTTGGAGAAGAAGCTTATGGAAAGGTGGATGTAATTGGAATTGATGAAGCACAGTTCTTCGATGATCTTTACGAGTTTTGTTGTAAAGCTGCAGATCATGATGGGAAAACTGTTGTCGTTGCTGGTCTTGATGGCGATTATTTAAGACGAAACTTTGGTCCGGTGCTTGATATAGTACCTCTTGCTGATACGGTAACTAAATTAACCGCCAGATGTGAATTATGCGGCAAAAAGGCCCATTTCACTTTCAGGAAGACTAACGAGACGAAAACTGAACTTATTGGTGGAGCGGATGTGTATATGCCTGTTTGCCGTCAACATTATGTTAACGGGCATATCGTGAAGAAACCCATTGTTTAA | 651 | 42.55 | MLHHIPLPQIQNIMSLTPTDQDQITNTGELHVIVGPMFAGKTTALLRRIKSEATNGRNIAMIKSNKDTRYAIDSVVTHDGTKYPCWALPDLLSFKQKLGEEAYGKVDVIGIDEAQFFDDLYEFCCKAADHDGKTVVVAGLDGDYLRRNFGPVLDIVPLADTVTKLTARCELCGKKAHFTFRKTNETKTELIGGADVYMPVCRQHYVNGHIVKKPIV | 216 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Hetu33g00594 | 216 | PANTHER | THYMIDINE KINASE | 23 | 213 | IPR001267 | GO:0004797(InterPro)|GO:0004797(PANTHER)|GO:0005524(InterPro)|GO:0046104(PANTHER) | |
| Hetu33g00594 | 216 | FunFam | Thymidine kinase | 24 | 165 | - | - | |
| Hetu33g00594 | 216 | Gene3D | - | 166 | 207 | - | - | |
| Hetu33g00594 | 216 | FunFam | Thymidine kinase | 166 | 208 | - | - | |
| Hetu33g00594 | 216 | ProSitePatterns | Thymidine kinase cellular-type signature. | 192 | 205 | IPR020633 | GO:0004797(InterPro)|GO:0005524(InterPro) | |
| Hetu33g00594 | 216 | PIRSF | Tdk | 25 | 214 | IPR001267 | GO:0004797(InterPro)|GO:0005524(InterPro) | |
| Hetu33g00594 | 216 | Pfam | Thymidine kinase | 28 | 205 | IPR001267 | GO:0004797(InterPro)|GO:0005524(InterPro) | |
| Hetu33g00594 | 216 | SUPERFAMILY | Glucocorticoid receptor-like (DNA-binding domain) | 166 | 208 | - | - | |
| Hetu33g00594 | 216 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 28 | 166 | IPR027417 | - | |
| Hetu33g00594 | 216 | Gene3D | - | 21 | 165 | IPR027417 | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Hetu33g00594 | K00857 | thymidine kinase [EC:2.7.1.21] |
| Select | Gene_1 | Gene_2 | Event_name |
|---|---|---|---|
| 299924 | Hetu31g00448 | Hetu33g00594 | |
| 300929 | Hetu32g00500 | Hetu33g00594 | |
| 405284 | Hetu10g00219 | Hetu33g00594 | |
| 406294 | Hetu11g00203 | Hetu33g00594 |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Hetu | Hetu-Chr33:18871662 | Hetu32g02425 | Hetu-Chr32:142647627 | dispersed | |
| Hetu | Hetu-Chr10:9400647 | Hetu33g00594 | Hetu-Chr33:18871662 | wgd | |
| Hetu | Hetu-Chr11:7260495 | Hetu33g00594 | Hetu-Chr33:18871662 | wgd | |
| Hetu | Hetu-Chr11:10279019 | Hetu33g00594 | Hetu-Chr33:18871662 | wgd | |
| Hetu | Hetu-Chr31:14901325 | Hetu33g00594 | Hetu-Chr33:18871662 | wgd | |
| Hetu | Hetu-Chr32:19233564 | Hetu33g00594 | Hetu-Chr33:18871662 | wgd |