Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Hetu33g00690 | ATGGCCGAAAAGAATAGCAATTTGGCTACTGGAACCTCTGGACCAAGTCAAGAAGAAGATGGAAACTCCGGCGGCATCCGGACGGTGGAGATGCTGCTGAGACTATTTCCGGTGGGCCTGTGTGTGGCTGCACTAGCTGTCATGATTAAGGATTCTGAGACTAATGATTATGGCTCTTTATCCTACTCCAACTTCACTGGTTTTAGGTTTTTGGTGCATGCGAATGGCGTATTGGCTGGTTATTCTCTAGTGACAGCTGCTTTCACGGCAGTACCTCGTCCAATGACCATGCCTCGAGCCTGGACCTTCTTTCTCCTTGATCAGGTTTCGACATACTTGATATTGGCTGCGGGTGCTGTGGCAACTGAGGTGGCATTTTTGGCTTATAAAGGCGACGTGACGGTGACATGGAGTGAAGCGTGTGGGACCTACGGTCACTTTTGTAAACAAGCAACAGCGTCAATCATCATCACTTTCTTGGTGGTGATTTGTTACATTTTACTATCGTTAATCTCATCGTATAGGCTCTTCAGCAAGTATGATGCACCTGTCGAGTACCGTAACAAGGGAATTGAAATCGTTGACTTTGGGAATTAA | 597 | 46.73 | MAEKNSNLATGTSGPSQEEDGNSGGIRTVEMLLRLFPVGLCVAALAVMIKDSETNDYGSLSYSNFTGFRFLVHANGVLAGYSLVTAAFTAVPRPMTMPRAWTFFLLDQVSTYLILAAGAVATEVAFLAYKGDVTVTWSEACGTYGHFCKQATASIIITFLVVICYILLSLISSYRLFSKYDAPVEYRNKGIEIVDFGN | 198 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Hetu33g00690 | 198 | PANTHER | CASP-LIKE PROTEIN 4A4 | 27 | 178 | - | - | |
| Hetu33g00690 | 198 | NCBIfam | plant integral membrane protein TIGR01569 | 32 | 174 | IPR006459 | - | |
| Hetu33g00690 | 198 | MobiDBLite | consensus disorder prediction | 1 | 22 | - | - | |
| Hetu33g00690 | 198 | Pfam | Casparian strip membrane protein domain | 25 | 164 | IPR006702 | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Hetu33g00690 | - | - |
| Select | Gene_1 | Gene_2 | Event_name |
|---|---|---|---|
| 299956 | Hetu31g00536 | Hetu33g00690 | |
| 300964 | Hetu32g00598 | Hetu33g00690 |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Hetu | Hetu-Chr33:24111117 | Hetu41g00636 | Hetu-Chr41:21282065 | dispersed | |
| Hetu | Hetu-Chr16:143965469 | Hetu33g00690 | Hetu-Chr33:24111117 | wgd | |
| Hetu | Hetu-Chr17:136088337 | Hetu33g00690 | Hetu-Chr33:24111117 | wgd | |
| Hetu | Hetu-Chr31:19883157 | Hetu33g00690 | Hetu-Chr33:24111117 | wgd | |
| Hetu | Hetu-Chr32:24278564 | Hetu33g00690 | Hetu-Chr33:24111117 | wgd |