AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hetu33g00831 ATGGGGCACACTGGTTCTTCATCTAGAAGAAAACACTCAAATAAAAAGACTCTCAAGGGTTCCCGAAAAAAGAAAAGTAGAAGTAAGTCGAAGAAGCTTCGTCATCGTGACGATTTGGATTCATCGAGTTCGGATGATGAATCCGCTAGTTCATCGCTTAATTCGTTATCTAGTTCAGAAGGTGAGTATAGAAGTAAAAGGGATCGTTCGCGCTCACGAAGTGGAATAAAGGGTAGTAAGAAACGGAAGAGACGAAGGTATTCAAGTGAGGATAGTAGTGATGATTCGCTACCCGTGAAGAAACGAAAACGGTCGAAAAAAAGTAAAAAGATCAAGAAGAAGAAGAAGAGTTCGAAACGCGATGGTTATGTTAGTTCTGCAAGCAGTGATTCAGGAAGCTGCTCGACGTGTAAAGACGAAGATATCAGTAGCGATGAATTGGGTTCACGCGAGAGGTCGAGGGGTAGGTCCAGAGAAAAGCGAAAGGGTCATAGAGATTCAACCAAGGGTAAAACTGGAAATAGGAAGAACAGGAGTGAAGCTAGGAGGTCTATTTCACCAAGCAGCAGTTACGGCAGTGAAAGGATTGAGAATACGACGATGGAAAACAACCCGGTGAGGTTAAGATCGGTTATTACGGTTGCAAACGTAGAGAACGAAGAAGACGACAATATGAAAATTGACGAGCTTAAAGAAGAGACTGTGTATGATTATGATGATTACCCGTCTAGTAAAAGCAATGATAGCGTTGAATTAGACGGTCGTTTTAATTATTCTCCTGATAAAGGAAGTGTGGCTAAAGAAGTAAACTCTGGTTCTGTACTTGATGATAATAAGGGAAAGGAGAGCAATGTTTCTGATGATTTGGAGTCAATTTTGAGACAAAAAGCGTTAGAAAATTTAAGTAGATTCCGAGGTGGGACTAAAACGAAACCAGTAGCTCCTGTTGATGATAAACCTAAGAGCGATCAAACCGACGTTAAGCAGTTGACACTTGAAACCGTTAGCACGACACCGGTGTCGCAGCCAGTACCACATAGGAGTAGGTTTACGTGGAGACGAGATCCTTCTGCGGCAACAGGGAAAGATGAAAAGGCTGCAACTTACAGTGAGCCGCACTCTAGTGGATCACAGCCAGCTGAACTGAAGTTACCAACGAGCAGGGTAGATAATAAGATATTGAATGAGACATCGATGGTCGATACTGATAATGTTGACCAAAAGTCAACTGCCGTTGTTGAAACACCCTCTTCTGCGCCTAAACAAGAAGGTAGCTCTAAGGAGCAGCAGAATGAAAGCAATGACAATTCACAGTTTGAGAAGAAGACGATGTCTGTGATGAGGGGTGGTGAAATGGTGCAGGTAAGCTACAAGGTTTACATACCAAACAAAGCACCCGCTTTGGCTAGGAGGAAACTTAAGCGGTAA 1428 42.86 MGHTGSSSRRKHSNKKTLKGSRKKKSRSKSKKLRHRDDLDSSSSDDESASSSLNSLSSSEGEYRSKRDRSRSRSGIKGSKKRKRRRYSSEDSSDDSLPVKKRKRSKKSKKIKKKKKSSKRDGYVSSASSDSGSCSTCKDEDISSDELGSRERSRGRSREKRKGHRDSTKGKTGNRKNRSEARRSISPSSSYGSERIENTTMENNPVRLRSVITVANVENEEDDNMKIDELKEETVYDYDDYPSSKSNDSVELDGRFNYSPDKGSVAKEVNSGSVLDDNKGKESNVSDDLESILRQKALENLSRFRGGTKTKPVAPVDDKPKSDQTDVKQLTLETVSTTPVSQPVPHRSRFTWRRDPSAATGKDEKAATYSEPHSSGSQPAELKLPTSRVDNKILNETSMVDTDNVDQKSTAVVETPSSAPKQEGSSKEQQNESNDNSQFEKKTMSVMRGGEMVQVSYKVYIPNKAPALARRKLKR 475
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hetu33g00831 475 MobiDBLite consensus disorder prediction 45 60 - -
Hetu33g00831 475 MobiDBLite consensus disorder prediction 280 294 - -
Hetu33g00831 475 MobiDBLite consensus disorder prediction 312 326 - -
Hetu33g00831 475 MobiDBLite consensus disorder prediction 1 445 - -
Hetu33g00831 475 MobiDBLite consensus disorder prediction 102 119 - -
Hetu33g00831 475 MobiDBLite consensus disorder prediction 327 345 - -
Hetu33g00831 475 MobiDBLite consensus disorder prediction 348 369 - -
Hetu33g00831 475 MobiDBLite consensus disorder prediction 139 154 - -
Hetu33g00831 475 MobiDBLite consensus disorder prediction 70 84 - -
Hetu33g00831 475 MobiDBLite consensus disorder prediction 85 101 - -
Hetu33g00831 475 MobiDBLite consensus disorder prediction 183 210 - -
Hetu33g00831 475 MobiDBLite consensus disorder prediction 122 138 - -
Hetu33g00831 475 MobiDBLite consensus disorder prediction 1 32 - -
Hetu33g00831 475 MobiDBLite consensus disorder prediction 370 443 - -
Hetu33g00831 475 MobiDBLite consensus disorder prediction 155 169 - -
Hetu33g00831 475 PANTHER TRANSCRIPTIONAL REGULATOR ATRX-LIKE PROTEIN 1 333 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hetu33g00831 - -
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Event-related genes

Select Gene_1 Gene_2 Event_name
299999 Hetu31g00711 Hetu33g00831
300998 Hetu32g00766 Hetu33g00831
409899 Hetu16g02536 Hetu33g00831
410539 Hetu17g02386 Hetu33g00831
411297 Hetu18g02699 Hetu33g00831
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Hetu Hetu-Chr17:125749820 Hetu33g00831 Hetu-Chr33:33535201 dispersed
Hetu Hetu-Chr16:133816610 Hetu33g00831 Hetu-Chr33:33535201 wgd
Hetu Hetu-Chr18:134801700 Hetu33g00831 Hetu-Chr33:33535201 wgd
Hetu Hetu-Chr31:30763516 Hetu33g00831 Hetu-Chr33:33535201 wgd
Hetu Hetu-Chr32:33637255 Hetu33g00831 Hetu-Chr33:33535201 wgd