AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hetu33g00876 ATGGCACCCGGTCTTTTCGCGTGCTTTCGTAAACACTCTGCAACATCAGACATCAACAAAACAGAACAAACTTCGACAGAGGAGCTTACGGCGGAGGAGTTGAAGCGCGGGGGACCGGTGGTGTTGGAGTTATTCTCGTCGCAGGGATGTGCGACATCGCCTGAGGCGGAGCTTTTGTTTTCGAGATTAGGGAGGGGGGATTTTAATTTGGAGGTGCCGGTGGTGTTGTTGGCGTATCATGTGGATTATTGGGATTTTAATGGGTGGAAAGATTTGTTTGGGTCGAGCCAGTGGACGGTTAGGCAGAAGATGTATGTGGAGTCGTTGAATCTTGACACCATGTTCACGCCTCAGGTGGTGGTTCAGGGGAGATCGCATTGTATTGGAAATGATGAAGATGCGATGTTGGGTTGTGTTGCTGGTGCGCCTAGATACCCTCCGCCGGCGTTCCAGGCAACATTCCAGAGGCCTACACCAGAATCTTTGCAAGTCACTCTAAAAGGAACACTAAGGGCCAAACTTGACGGCCAGGGAGCTAATGTCATGGTGGCACTATATGAAAGCGGGCTCGTAACCGACTGCAAGAATGGCGACAACAAAGGGCGAGTCATAGCCAACGATTTTGTGGTTAGAAAGCTTTCAAAGATCTGGTCCCTCAAGAATCACCCTCCTAAGAAGACATTAACCGGAACTATAGATTTTGGCTTATGGGACGGTTTCAACAGCACGAAATGTGGGATCGTTGTGTTCGTGCAGCAACATGGTACACATCATATATTTGGTTCGCAGCGGATTCAACTACCTGCAGATATTTGA 816 49.02 MAPGLFACFRKHSATSDINKTEQTSTEELTAEELKRGGPVVLELFSSQGCATSPEAELLFSRLGRGDFNLEVPVVLLAYHVDYWDFNGWKDLFGSSQWTVRQKMYVESLNLDTMFTPQVVVQGRSHCIGNDEDAMLGCVAGAPRYPPPAFQATFQRPTPESLQVTLKGTLRAKLDGQGANVMVALYESGLVTDCKNGDNKGRVIANDFVVRKLSKIWSLKNHPPKKTLTGTIDFGLWDGFNSTKCGIVVFVQQHGTHHIFGSQRIQLPADI 271
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hetu33g00876 271 PANTHER - 1 271 IPR010634 -
Hetu33g00876 271 SUPERFAMILY Thioredoxin-like 37 267 IPR036249 -
Hetu33g00876 271 Pfam Protein of unknown function (DUF1223) 41 252 IPR010634 -
Hetu33g00876 271 Gene3D Immunoglobulins 149 269 IPR013783 -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hetu33g00876 - -
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Event-related genes

Select Gene_1 Gene_2 Event_name
300020 Hetu31g00754 Hetu33g00876
301020 Hetu32g00813 Hetu33g00876
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Hetu Hetu-Chr31:32508638 Hetu33g00876 Hetu-Chr33:35771422 wgd
Hetu Hetu-Chr32:35614450 Hetu33g00876 Hetu-Chr33:35771422 wgd