AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hetu33g01047 ATGAACTTTGATGTTTATGTTTTTTTTAAGTTTAAACAAGAAAGGTTAAGATTAGAAGATTTGGAGAAAAGGGAGTCCAAGAAGCTAAAAAAAGAAAAGAACGGGGGCTCAACAGCTGCGGATGATGTGAACAGTGACGTCATACCATCAGCATCCATGCTAAAGCAATTAGCAATAGGTGTTGAGACTACAAAAATTGTAAAGTCAATGAAGGATTTGATGATATTAGCAAGAGATTATTCACCAGTGAAAGAGAGATCTGGTTTGAGCTTATATGCCATGAAGTCTTTTGTAGTTGGGGAGAAAGAAGATAAGTTTGCTGCTGAGTTCGGTCGTGATGAAAAAGTAATGTCTTTTATCCATTTGCTCATGGATCCAGAAGGACATCTTTCGAGAAGGAAAACTAGATCTTGTATGGATAAAGCTCCAAAAGTTACTAAATTTTCCAAAGAAGTTCATGGTGCTCCTCCAGAAAGCTTTGTTCCGGAGCTTGCTGAAGCCATGGGAAGCATAAAAACTTTGAAGAAAATGGCGTTGTTTTGGAGTAGGGTTGTTATGGAATTGAGAAGGCTATGGTGTGAAGGAAAACATATTCCCGGCATCCCAACAGACGAAATTCCAAATTTAAATTCCTGTCTGTTACATCAGCAGTTGCAGGTTATCAATTGTTGTATTTCTAGAAAACAACGCCGCGCTATTGCCACTGCATCACTAGATTCTGTTCTGAAACAAGCCAATAATATTGCTGAATTGTCACATCCTCCTGCGGATCTTCTTCCAGAAAGCCCTCATGTGTATGCTCGAATTAGCTCCGGGAAATTTGTGCTTCGGTTAGGAGCTGACAAACAACTTGAAAACACAACATTATTGGATACCGGTGAGCCAGTATACACCCCGGTTATGCAGGAATGGCCTCTTCTCACAGAAGATATCATCAAAGAAACGGAGGAATTTGTATTACGTACAGGGAGTGTTGGTGCAGGGTGTTCTCAGCTTCTTTCCGATATGCAGGCTTTCAAGGCAGCAAATCCAGGGAGCATTTTAGAAGATTTTGTAAGATGGCATTCACCCCCTGATTGGATAGAAACGAATGACGAAAGTAAACAAGTTACCAGTGGTGATATTTCTCCTTCTAGAGGACACCTGAGTACACGTATGCAGAAAGAAGGTAATTTATGGCGAGAACTATGGCAAACAGCAAAACCGATACCTGCTATTAGACAAGCTCCGTTATACTATGAGGATTTATCTGTTGAAGGGATTCTGAATGGATTGGAGAATATCTCACCTTCTAGTTTGTTTGAGCAGTTGTTTGTTTCGCTTGTGTATGAGACGATGGCCGTGATGGCATTGGACCCTGAAAGGGTCATAAAGATCATGAACGCACAGCCTGATCAGACGCATACAAAAGAGGATCCAAATAAGCTCCGGAAAACACCATCAAAGAACCAAAAAGACAACCCAACAGCCGCACAGTCCTCAACAATGTTTTCAAAGAAGCCAGCGAAACCAATCTCCTGCTGA 1524 41.08 MNFDVYVFFKFKQERLRLEDLEKRESKKLKKEKNGGSTAADDVNSDVIPSASMLKQLAIGVETTKIVKSMKDLMILARDYSPVKERSGLSLYAMKSFVVGEKEDKFAAEFGRDEKVMSFIHLLMDPEGHLSRRKTRSCMDKAPKVTKFSKEVHGAPPESFVPELAEAMGSIKTLKKMALFWSRVVMELRRLWCEGKHIPGIPTDEIPNLNSCLLHQQLQVINCCISRKQRRAIATASLDSVLKQANNIAELSHPPADLLPESPHVYARISSGKFVLRLGADKQLENTTLLDTGEPVYTPVMQEWPLLTEDIIKETEEFVLRTGSVGAGCSQLLSDMQAFKAANPGSILEDFVRWHSPPDWIETNDESKQVTSGDISPSRGHLSTRMQKEGNLWRELWQTAKPIPAIRQAPLYYEDLSVEGILNGLENISPSSLFEQLFVSLVYETMAVMALDPERVIKIMNAQPDQTHTKEDPNKLRKTPSKNQKDNPTAAQSSTMFSKKPAKPISC 507
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hetu33g01047 507 MobiDBLite consensus disorder prediction 363 383 - -
Hetu33g01047 507 Pfam Rab3 GTPase-activating protein catalytic subunit 277 426 IPR026147 -
Hetu33g01047 507 MobiDBLite consensus disorder prediction 462 507 - -
Hetu33g01047 507 PANTHER RAB3 GTPASE-ACTIVATING PROTEIN CATALYTIC SUBUNIT 45 466 IPR045700 GO:0005096(InterPro)|GO:0005096(PANTHER)|GO:0043547(InterPro)|GO:0043547(PANTHER)
Hetu33g01047 507 MobiDBLite consensus disorder prediction 483 501 - -
Hetu33g01047 507 MobiDBLite consensus disorder prediction 362 383 - -
Hetu33g01047 507 MobiDBLite consensus disorder prediction 468 482 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hetu33g01047 K18270 Rab3 GTPase-activating protein catalytic subunit
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Event-related genes

Select Gene_1 Gene_2 Event_name
105601 Hetu13g00069 Hetu33g01047
105604 Hetu13g00081 Hetu33g01047
105845 Hetu14g00245 Hetu33g01047
106230 Hetu15g00127 Hetu33g01047
300073 Hetu31g00934 Hetu33g01047
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Hetu Hetu-Chr31:41614253 Hetu33g01047 Hetu-Chr33:44280177 wgd
Hetu Hetu-Chr32:47636203 Hetu33g01047 Hetu-Chr33:44280177 wgd