Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Hetu33g01047 | ATGAACTTTGATGTTTATGTTTTTTTTAAGTTTAAACAAGAAAGGTTAAGATTAGAAGATTTGGAGAAAAGGGAGTCCAAGAAGCTAAAAAAAGAAAAGAACGGGGGCTCAACAGCTGCGGATGATGTGAACAGTGACGTCATACCATCAGCATCCATGCTAAAGCAATTAGCAATAGGTGTTGAGACTACAAAAATTGTAAAGTCAATGAAGGATTTGATGATATTAGCAAGAGATTATTCACCAGTGAAAGAGAGATCTGGTTTGAGCTTATATGCCATGAAGTCTTTTGTAGTTGGGGAGAAAGAAGATAAGTTTGCTGCTGAGTTCGGTCGTGATGAAAAAGTAATGTCTTTTATCCATTTGCTCATGGATCCAGAAGGACATCTTTCGAGAAGGAAAACTAGATCTTGTATGGATAAAGCTCCAAAAGTTACTAAATTTTCCAAAGAAGTTCATGGTGCTCCTCCAGAAAGCTTTGTTCCGGAGCTTGCTGAAGCCATGGGAAGCATAAAAACTTTGAAGAAAATGGCGTTGTTTTGGAGTAGGGTTGTTATGGAATTGAGAAGGCTATGGTGTGAAGGAAAACATATTCCCGGCATCCCAACAGACGAAATTCCAAATTTAAATTCCTGTCTGTTACATCAGCAGTTGCAGGTTATCAATTGTTGTATTTCTAGAAAACAACGCCGCGCTATTGCCACTGCATCACTAGATTCTGTTCTGAAACAAGCCAATAATATTGCTGAATTGTCACATCCTCCTGCGGATCTTCTTCCAGAAAGCCCTCATGTGTATGCTCGAATTAGCTCCGGGAAATTTGTGCTTCGGTTAGGAGCTGACAAACAACTTGAAAACACAACATTATTGGATACCGGTGAGCCAGTATACACCCCGGTTATGCAGGAATGGCCTCTTCTCACAGAAGATATCATCAAAGAAACGGAGGAATTTGTATTACGTACAGGGAGTGTTGGTGCAGGGTGTTCTCAGCTTCTTTCCGATATGCAGGCTTTCAAGGCAGCAAATCCAGGGAGCATTTTAGAAGATTTTGTAAGATGGCATTCACCCCCTGATTGGATAGAAACGAATGACGAAAGTAAACAAGTTACCAGTGGTGATATTTCTCCTTCTAGAGGACACCTGAGTACACGTATGCAGAAAGAAGGTAATTTATGGCGAGAACTATGGCAAACAGCAAAACCGATACCTGCTATTAGACAAGCTCCGTTATACTATGAGGATTTATCTGTTGAAGGGATTCTGAATGGATTGGAGAATATCTCACCTTCTAGTTTGTTTGAGCAGTTGTTTGTTTCGCTTGTGTATGAGACGATGGCCGTGATGGCATTGGACCCTGAAAGGGTCATAAAGATCATGAACGCACAGCCTGATCAGACGCATACAAAAGAGGATCCAAATAAGCTCCGGAAAACACCATCAAAGAACCAAAAAGACAACCCAACAGCCGCACAGTCCTCAACAATGTTTTCAAAGAAGCCAGCGAAACCAATCTCCTGCTGA | 1524 | 41.08 | MNFDVYVFFKFKQERLRLEDLEKRESKKLKKEKNGGSTAADDVNSDVIPSASMLKQLAIGVETTKIVKSMKDLMILARDYSPVKERSGLSLYAMKSFVVGEKEDKFAAEFGRDEKVMSFIHLLMDPEGHLSRRKTRSCMDKAPKVTKFSKEVHGAPPESFVPELAEAMGSIKTLKKMALFWSRVVMELRRLWCEGKHIPGIPTDEIPNLNSCLLHQQLQVINCCISRKQRRAIATASLDSVLKQANNIAELSHPPADLLPESPHVYARISSGKFVLRLGADKQLENTTLLDTGEPVYTPVMQEWPLLTEDIIKETEEFVLRTGSVGAGCSQLLSDMQAFKAANPGSILEDFVRWHSPPDWIETNDESKQVTSGDISPSRGHLSTRMQKEGNLWRELWQTAKPIPAIRQAPLYYEDLSVEGILNGLENISPSSLFEQLFVSLVYETMAVMALDPERVIKIMNAQPDQTHTKEDPNKLRKTPSKNQKDNPTAAQSSTMFSKKPAKPISC | 507 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Hetu33g01047 | 507 | MobiDBLite | consensus disorder prediction | 363 | 383 | - | - | |
| Hetu33g01047 | 507 | Pfam | Rab3 GTPase-activating protein catalytic subunit | 277 | 426 | IPR026147 | - | |
| Hetu33g01047 | 507 | MobiDBLite | consensus disorder prediction | 462 | 507 | - | - | |
| Hetu33g01047 | 507 | PANTHER | RAB3 GTPASE-ACTIVATING PROTEIN CATALYTIC SUBUNIT | 45 | 466 | IPR045700 | GO:0005096(InterPro)|GO:0005096(PANTHER)|GO:0043547(InterPro)|GO:0043547(PANTHER) | |
| Hetu33g01047 | 507 | MobiDBLite | consensus disorder prediction | 483 | 501 | - | - | |
| Hetu33g01047 | 507 | MobiDBLite | consensus disorder prediction | 362 | 383 | - | - | |
| Hetu33g01047 | 507 | MobiDBLite | consensus disorder prediction | 468 | 482 | - | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Hetu33g01047 | K18270 | Rab3 GTPase-activating protein catalytic subunit |
| Select | Gene_1 | Gene_2 | Event_name |
|---|---|---|---|
| 105601 | Hetu13g00069 | Hetu33g01047 | |
| 105604 | Hetu13g00081 | Hetu33g01047 | |
| 105845 | Hetu14g00245 | Hetu33g01047 | |
| 106230 | Hetu15g00127 | Hetu33g01047 | |
| 300073 | Hetu31g00934 | Hetu33g01047 |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Hetu | Hetu-Chr31:41614253 | Hetu33g01047 | Hetu-Chr33:44280177 | wgd | |
| Hetu | Hetu-Chr32:47636203 | Hetu33g01047 | Hetu-Chr33:44280177 | wgd |