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AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hetu33g01073 ATGGCGGGGAAGACAGTGGTGCATCCGGCGGTGGAACCTGTGTCGTATCTGATCGGAACCTGGAGAGGTGAAGGAGAGGGGGGTTTCCCCACCATATCCTCCTTCGCTTACGGCGAAGAGCTCATTTTCACTCATCCCGGTAACAAGCAAGCTGCTGTTATTGTAAATATTGAGAAGCCTATAATAGCTTACTCTCAGAAGACTTGGAAATTGAGTTCAGGAGAGCCCATGCATGCTGAGAGCGGCTACTGGAGGCTGAAACCCGATGGAACAATTGAGGTTGTCATCGCACAGAGCACTGGTCTCGTTGAACTTCAGAAAGGAACATACGATGCAGAAAAGAAAGTGGTGAAGCTTCAAAGTGAGCTTGTTGCAAATGCTTCAAAGGTTAAAGAGATAACTCGAGTTTTTACTCTGGTTGATGAAGAGTTATCTTATGTTGTTGAGATGGCTACCAACCTAACCAATCTTCAACCACACCTGAAAGCTTCTCTTAAGAAGCTCTAA 507 46.15 MAGKTVVHPAVEPVSYLIGTWRGEGEGGFPTISSFAYGEELIFTHPGNKQAAVIVNIEKPIIAYSQKTWKLSSGEPMHAESGYWRLKPDGTIEVVIAQSTGLVELQKGTYDAEKKVVKLQSELVANASKVKEITRVFTLVDEELSYVVEMATNLTNLQPHLKASLKKL 168
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hetu33g01073 168 Gene3D - 6 168 IPR012674 -
Hetu33g01073 168 PANTHER THAP4 PROTEIN 6 168 IPR045165 -
Hetu33g01073 168 SUPERFAMILY Lipocalins 7 167 IPR012674 -
Hetu33g01073 168 Pfam THAP4-like, heme-binding beta-barrel domain 11 167 IPR014878 -
Hetu33g01073 168 CDD lipocalin-heme-bd-THAP4-like 11 167 IPR014878 -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hetu33g01073 K23205 THAP domain-containing protein 4
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Event-related genes

Select Gene_1 Gene_2 Event_name
300079 Hetu31g00947 Hetu33g01073
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Hetu Hetu-Chr31:42266052 Hetu33g01073 Hetu-Chr33:44914758 wgd
Hetu Hetu-Chr32:46946976 Hetu33g01073 Hetu-Chr33:44914758 wgd