AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hetu33g01234 ATGATCCTCTATGGATATGATCAGGGCTGTGTTCCTTCAAGTCCATCCAAAGTGATTTCAAGGAAAATGGCGATTTCCGCGGGAAAATTCATATATTGCAAAGCATTTGAGCATCATTCACGAGTGTTCTTAAACCCCTGGGGGAAGACGAAGATTATAGTACGATGTTGTTCGAATTATCCAGTTAGGTATACTCCTAAGAAATATTCTACTTTGAATAAACCTAACGATCCTACTCCGGTTCCATCGAATTCCGAAAAGCTCGAATTCAAGCTATTCATTGAAAATGATGATTTGAAGAATGTTGACTGGCCGAGGTCAAGGATACGATCAAATTTGGACAAAAAATCACCGGATTTTAAGTCGGGTGATTTAAGATCAAAAGAAAAGAAAATTTGTAATGCGGCTGTGCAGTCGGAGGCGTTGGAAGATAGTTATAAATCGAGATCCGTGGAATCAAATCCTGTGGAAGAATTTCATGAATTTGATGTAATGGAAGGTCCTGAGGATGCTTTAGATGAATTTGACTCGCATAATGGTGAATATGAAATTAAACGTCTAGCGGTTGAACCGCATAATGGTGAATATGAAATTAAACATCTAGCGGTTGAACCTAGTAAAAGTAAAGAAGAAGCCGAGAAGACAGCGATTAGATTGCTTGCAGTAAGAGCATATACAGCACTTAAGCTGAAGAAGAAACTTTCTGGAAAGAAATTCTCCCCTGAAGTTGTCACTGCTGTGATCTCTGACTTCCAGAACAGGGGTTTGATAAATGATTTGTTGTATGCTGAAGCGTTTTCTCGATCAAGATGGTCTTTATCAAGTTGGGGTCCACATAGAATCAAGCAAGCCCTGGCCAAAAAGGGTGTAAATGATGTTGATGCACAGAAAGCAATAAAATTGGTTTTAGAAGACGGTGAAGCCGTCGATGATGATCAAGTTTCAAGATTTGGATTATCAAAGTCCTCGTTTGACCATTTGTTTGCACAAGCTTCAAAGCAATGGATTCGTGCCAAGGATCTCCCCAGTGAAAGACAGAAATCGAGAATCATCGCTTGGCTTCAATACCGTGGCTTTAATTGGGGAGTTATTAACTTTATCTTGAAAAGGTTACAATCCGAGCATCCGCCTTAA 1134 39.59 MILYGYDQGCVPSSPSKVISRKMAISAGKFIYCKAFEHHSRVFLNPWGKTKIIVRCCSNYPVRYTPKKYSTLNKPNDPTPVPSNSEKLEFKLFIENDDLKNVDWPRSRIRSNLDKKSPDFKSGDLRSKEKKICNAAVQSEALEDSYKSRSVESNPVEEFHEFDVMEGPEDALDEFDSHNGEYEIKRLAVEPHNGEYEIKHLAVEPSKSKEEAEKTAIRLLAVRAYTALKLKKKLSGKKFSPEVVTAVISDFQNRGLINDLLYAEAFSRSRWSLSSWGPHRIKQALAKKGVNDVDAQKAIKLVLEDGEAVDDDQVSRFGLSKSSFDHLFAQASKQWIRAKDLPSERQKSRIIAWLQYRGFNWGVINFILKRLQSEHPP 377
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hetu33g01234 377 PANTHER REGULATORY PROTEIN RECX FAMILY PROTEIN 39 376 IPR003783 GO:0006282(InterPro)
Hetu33g01234 377 Gene3D - 321 376 IPR036388 -
Hetu33g01234 377 Pfam RecX, first three-helix domain 215 249 IPR053926 -
Hetu33g01234 377 Pfam RecX, second three-helix domain 258 298 IPR053924 -
Hetu33g01234 377 Gene3D - 211 256 IPR036388 -
Hetu33g01234 377 Hamap Regulatory protein RecX [recX]. 194 375 IPR003783 GO:0006282(InterPro)
Hetu33g01234 377 Gene3D - 258 301 IPR036388 -
Hetu33g01234 377 Pfam RecX, third three-helix domain 324 368 IPR053925 -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hetu33g01234 K03565 regulatory protein
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Event-related genes

Select Gene_1 Gene_2 Event_name
301115 Hetu32g01164 Hetu33g01234
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Hetu Hetu-Chr33:54831096 Hetu41g02463 Hetu-Chr41:94706210 dispersed
Hetu Hetu-Chr32:55751881 Hetu33g01234 Hetu-Chr33:54831096 wgd