AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hetu33g01251 ATGAGCAGCGGCGAGGCTAGGGTTTCCATTCCTCACAACGCCCGTAAACTTATTCAACAAGTCACCAAAACCCTAACCCACAACCACACCGATTCCTTCGTATACTCCACCCTCATCGACTCCGCCATGGATCCTGATGAAGCTACCCGCAGATTGAAGATGATTCACGACATTCGAGAGATTGCCGGAAAGCATAGCGTTGAGGATGTCTATACAATGCTCAAAGAGTGTAATCTCGATGCTAATGAAGCTGCTCAGAGGCTGTTGTATATCGATACTTTTCATGTGGTTAAAAAGAAACATGACCGGCGAAAAATCATAAACAGTGATGTTTCTCAAGAGAATAAACATACACGGGTAAATCACTGGAGGGGAGATAAGGGTGGGCGAGGGGCTTTCTACGCGTCAAAAGTTTTTGAAGATGTTGGCGGTGGGAGAAATTTGAGTTCCGGGAAGGAATATGGTGCTACTAATCGCGTAGAGAAGGTTTTGAAGCCAGCCGTGCCAGGTCATATGGGAAAAGAAAACAACATAGTACATGTGTCAAATTCTTGTGCCAATGTCAATGGTACACCAGCTTTATCCAATGGGAATTACAACCATAAGCTTGCATCTGTATCACCTGCAGATATCGCATCCCCTACCTCAGATCATGTTGTGGCTTCATCTCAGAACACCAAGCACATGTGCGCTGTGGGTACAATAAAATGTGAGATCGTAAAACGTAGTGGTTCTAATGAATCAAATGCAAGAATTCCAGCTGGCAAGAAGTTTACTGCTGATCAGTCAGATTTGGTTCCCGAAGAAGAGTCTGAGTTGACTATATCAGCTTCGAAACTTGATGTGATGTTGGAGAAGTTGACGCTATCTTCTCACCAAGCTGTTATTTTCCCTGATCATATACAAGTTCCCGAAAAATATAAAAGTCACAACGGAAACACTTCCGCAATAGCGCAGGATGGTGAAGTTCAAGATCCTGTTTCTGAAGATGTATCGTGTTTAGAAGATAACATCGCATCTGAATCTTCTGCTCCAACACACGAGCAGACGGTGGAGATAGTACCCCCTCCCCCTTCAACGGGATTTCAGAATATTCCGGTTCTTCAAACCACAAGGGACTACTATGGTTATATGCCACCTCTTATGGGCCCACATTTTGTGCAACTTGATTTACCTGAGCCACAGGCAACTGTATCTTCAGTGAGTCAGTCTTCGGTAACACAACCTGCAATCGCTAGCCAGAGTACTTTAGCGTTATCCCCACCGCTGTTTCCTTATTTCAGACCATATCCAAACTACATTCCTTATAACCCGTATTTCCCGCATATGTATTTGCCGCCAAATGCCCCTTTGTTGACCCACGGTGTCTTCCCTCAGCCATCACTGCCACCAACTGCTGTCAATGTCCATCATATGGCGGCAACAGCAGGGCTGACAATACCTACTCCTTCGCAGAACAAACAAGGAAGTAACGAAGATAATACCGCATCTGAAACAAAAGATAACACTATTCTTTCAACGGTTCAACAGGTTGAAGATACACAAGCTCGGGCTCAAGCACCTCTCGATTTACCAAATATACTGCCGAATTATTTCTACGGCTTCCCACATGGACAACACATGGCGGCCTTTTCGCCTTTACAAGCTGCTGCGCTTTATCATTCTTCACAGACCATGACCGCTCAATCTACCATACAACCGCCATTCATTTATCAACCACCACCTACTGGCGGTACGATTGAACACCCTCAACATCAGCATGCACCACAGATAAACCACGACACCGCATTAGTGAACACGGGGACTGGTTGA 1812 45.2 MSSGEARVSIPHNARKLIQQVTKTLTHNHTDSFVYSTLIDSAMDPDEATRRLKMIHDIREIAGKHSVEDVYTMLKECNLDANEAAQRLLYIDTFHVVKKKHDRRKIINSDVSQENKHTRVNHWRGDKGGRGAFYASKVFEDVGGGRNLSSGKEYGATNRVEKVLKPAVPGHMGKENNIVHVSNSCANVNGTPALSNGNYNHKLASVSPADIASPTSDHVVASSQNTKHMCAVGTIKCEIVKRSGSNESNARIPAGKKFTADQSDLVPEEESELTISASKLDVMLEKLTLSSHQAVIFPDHIQVPEKYKSHNGNTSAIAQDGEVQDPVSEDVSCLEDNIASESSAPTHEQTVEIVPPPPSTGFQNIPVLQTTRDYYGYMPPLMGPHFVQLDLPEPQATVSSVSQSSVTQPAIASQSTLALSPPLFPYFRPYPNYIPYNPYFPHMYLPPNAPLLTHGVFPQPSLPPTAVNVHHMAATAGLTIPTPSQNKQGSNEDNTASETKDNTILSTVQQVEDTQARAQAPLDLPNILPNYFYGFPHGQHMAAFSPLQAAALYHSSQTMTAQSTIQPPFIYQPPPTGGTIEHPQHQHAPQINHDTALVNTGTG 603
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hetu33g01251 603 Pfam GBF-interacting protein 1 N-terminal 10 52 IPR009719 -
Hetu33g01251 603 Pfam GBF-interacting protein 1 N-terminal 53 105 IPR009719 -
Hetu33g01251 603 MobiDBLite consensus disorder prediction 479 502 - -
Hetu33g01251 603 PANTHER FLOCCULATION PROTEIN (DUF1296) 486 593 IPR044277 GO:0051082(PANTHER)
Hetu33g01251 603 MobiDBLite consensus disorder prediction 570 603 - -
Hetu33g01251 603 MobiDBLite consensus disorder prediction 583 603 - -
Hetu33g01251 603 SUPERFAMILY UBA-like 53 105 IPR009060 GO:0005515(InterPro)
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hetu33g01251 - -
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Event-related genes

Select Gene_1 Gene_2 Event_name
300135 Hetu31g01140 Hetu33g01251
301123 Hetu32g01189 Hetu33g01251
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Hetu Hetu-Chr31:53001224 Hetu33g01251 Hetu-Chr33:56138577 wgd
Hetu Hetu-Chr32:57241056 Hetu33g01251 Hetu-Chr33:56138577 wgd