Gene detail

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Species

Gene ID

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Or, Query Sequence

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Gene details

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Hetu33g01254	ATGCCTACAAAAGAGTCACATAACTCATATACAATAAGCATGGGGGTTAAAGATGCTGTTAACCACAAATCTGCAACGATGCCGAAGATTCCACTTTGTGACCTGCCCGTACTGCCCCAAAATCATCTTCCTCTTCACCTTCAACTCCAGAAAACTCGCGTCTTCTGCAACAACGATGCTCCAACTAATACAGAGGATATAACGTACTCCGGTGCGTATGCGGCGTTGGGGCTTGATAATAGTTTAAAGCTGGATGAGTTTAGGAAGAATTTTAAAGTTGAAGTGATTAAGCTTAATGAAGAGGATATGGAGTTTGATTTGATCGGAATTGATGCGTCCATTGCGAATGCTTTTAGAAGAATTCTCATATCTGAGCTGCCCACAATGGCTATTGAGAAGGTTCTTGTTGCAAACAGTTCATCAGTCGTACAAGACGAAGTACTTGCCCACCGCTTGGGTCTCATTCCTATAAAAGTTGATCCAAGACTGTTCGATTATATGTCAGAAAATGACGTCCCTAATGAGAAAAACAGCATTGTTTTTAGCCTCAATATCAAGTGTGACCGAAAAACTGGTGAACGCCTCACAGTGTACTCGCACGATCTTAAGTGGTTACCATTCGGCAGTGAATACGTGCTCCCCACTGAAAACTCTTCAGACCCGTCATCAAAACCGAAAACGTACACGTCATTTACTTCCAGCCAAGACTCCTTGCCGGAGTTTTCAAATAATCCCATCACCGTCACCCCCGGTATCATTATATCGAAACTCGGACCTGGCCAGGAAATTGAGCTAGAAGCACATGCTGTTAAAGGTGTTGGTAAAACACATGCCAAGTGGTCTCCTGTAGCCACTGCTTGGTACAGAATGCTCCCTGAGGTTGTATTGCTACAAGATATTGAGGACGATGATGCTCAGAAACTTGTAAACAAATGCCCCGTTAACGTTTTTGACATTGAAGATATGGGTAAAGGTGTGAAGAGAGCAACTGTGGCTAGACCAAGAGCCTGTACAGTTTGCAGAGAATGCATTAGAGAGCCTGGATGGAATGAAAAGGTGGCATTAAGACGTGTGAAAGATCATTTTATCTTTACTATTGAATCAACTGGAGCATTGCCACCTGAGGTGTTATTTACTGAAGCTGTCAAGATTCTAGAAGACAAGTGTGAAAGTGTCATAACCGAGCTCTCATAG	1194	42.96	MPTKESHNSYTISMGVKDAVNHKSATMPKIPLCDLPVLPQNHLPLHLQLQKTRVFCNNDAPTNTEDITYSGAYAALGLDNSLKLDEFRKNFKVEVIKLNEEDMEFDLIGIDASIANAFRRILISELPTMAIEKVLVANSSSVVQDEVLAHRLGLIPIKVDPRLFDYMSENDVPNEKNSIVFSLNIKCDRKTGERLTVYSHDLKWLPFGSEYVLPTENSSDPSSKPKTYTSFTSSQDSLPEFSNNPITVTPGIIISKLGPGQEIELEAHAVKGVGKTHAKWSPVATAWYRMLPEVVLLQDIEDDDAQKLVNKCPVNVFDIEDMGKGVKRATVARPRACTVCRECIREPGWNEKVALRRVKDHFIFTIESTGALPPEVLFTEAVKILEDKCESVITELS	397

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Hetu33g01254	397	SUPERFAMILY	RBP11-like subunits of RNA polymerase	89	396	IPR036603	GO:0006351(InterPro)\|GO:0046983(InterPro)
	Hetu33g01254	397	Gene3D	-	93	388	IPR036603	GO:0006351(InterPro)\|GO:0046983(InterPro)
	Hetu33g01254	397	Pfam	RNA polymerase Rpb3-Rpb11 dimerisation domain	104	389	IPR011263	GO:0003899(InterPro)\|GO:0006351(InterPro)
	Hetu33g01254	397	PANTHER	DNA-DIRECTED RNA POLYMERASE	49	397	IPR050518	GO:0001054(PANTHER)\|GO:0001056(PANTHER)\|GO:0003899(PANTHER)\|GO:0005666(PANTHER)\|GO:0005736(PANTHER)
	Hetu33g01254	397	Pfam	RNA polymerase Rpb3-RpoA insert domain	148	279	IPR011262	GO:0003899(InterPro)\|GO:0006351(InterPro)\|GO:0046983(InterPro)
	Hetu33g01254	397	SUPERFAMILY	Insert subdomain of RNA polymerase alpha subunit	127	282	IPR036643	-
	Hetu33g01254	397	Gene3D	-	128	278	IPR036643	-
	Hetu33g01254	397	SMART	rpoldneu2	102	395	IPR011263	GO:0003899(InterPro)\|GO:0006351(InterPro)
	Hetu33g01254	397	MobiDBLite	consensus disorder prediction	215	236	-	-
	Hetu33g01254	397	CDD	RNAP-I-II-AC40	91	395	IPR033901	GO:0001054(InterPro)\|GO:0001056(InterPro)
	Hetu33g01254	397	Hamap	DNA-directed RNA polymerase subunit Rpo3 [rpo3].	92	396	IPR022842	GO:0003899(InterPro)\|GO:0006351(InterPro)

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Hetu33g01254	K03027	DNA-directed RNA polymerases I and III subunit RPAC1

Event-related genes

Select	Gene_1	Gene_2	Event_name
	300137	Hetu31g01142	Hetu33g01254
	301125	Hetu32g01194	Hetu33g01254

Duplication type information

Select	Gene1	Location1	Gene2	Location2	Duplicated-type
	Hetu	Hetu-Chr32:57377971	Hetu33g01254	Hetu-Chr33:56171975	dispersed
	Hetu	Hetu-Chr33:56171975	Hetu3g00951	Hetu-Chr3:48693110	dispersed
	Hetu	Hetu-Chr31:53072388	Hetu33g01254	Hetu-Chr33:56171975	wgd
	Hetu	Hetu-Chr32:57327182	Hetu33g01254	Hetu-Chr33:56171975	wgd