AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hetu33g02093 ATGGCTTCTATTGCTCACCTTCATCACTCCCCTCTCTCCGGAAACAACCTTCGTCATTCGCGTATTCCTGGCCTCCAGTTACCAACCCTTGCCTGCAAAAACCTTGTCGCTTTGCCTCTCCGATTTAAGCCAATTGATATACTATCTATTCGACAACCGATTCCCTGTACTGGTGGTGGAGGTGGTAGTGCTGGTGTTGGCAATGGAAGCGGTGGCGGAGGAGGAGGAGGTAATGGTGGTGATAGTCGCCCGGACGAAGGGGGAAAATTCGACGACAATTCATCGGTAGACAGTTTCGGGCCATTTGGGGCTTTACTTAGTGGTTGGAGATCAAGGGTTGCTGCTGATCCCCAATTTGCATTCAAGGTGTTAATGGAGGAAGTTGTGGGTGTGAGTGCAACCGTGTTCGGTGACATGGCAACGCGTCCAAATTTCGGTCTAAACGAGCTTGATTTCGTGTTTTCGACACTAGTCGTAGGATCAATCTTGAATTTCACCCTTATGTATCTATTAGCACCCACCATGTCATCTGGATCAACAACCCTCCCTTTCATATTCGCCAATTCGCCAACAAGCCACATGTTTGAGCCCGGTGCATACAGTGCGGTGAACCGGCTAGGGACATTTGTGTACAAAGGAATATTGTTTGCAGCAGTGGGGTTTGCTGCTGGTTTAGTTGGGACCGCGTTGTCCAATGGGTTGATCAAAATAAGGAAGAAAATGGACCCCGGGTTCGAGTCACCTAACAAGGCTCCACCTACTGTATTGAATGCGGTCACATGGGCGATTCACATGGGTTTAAGTGCTAATTTAAGGTACCAAAGTCTGAATGGGATCGAGTTTTTGTTGGCGAAGGGGTTACCGCCGTTGTTGTTTAAGAGCTCCGTGTTCGGGTTGAGACTGGCGAACAACGTTCTTGGTGGAATGACTTTTGTGATGTTGGCAAGGGTGACCGGATCGCAAAGCGCTGCTAGTGGTGAACACAAGGTTACCGATGAATAG 1002 48.9 MASIAHLHHSPLSGNNLRHSRIPGLQLPTLACKNLVALPLRFKPIDILSIRQPIPCTGGGGGSAGVGNGSGGGGGGGNGGDSRPDEGGKFDDNSSVDSFGPFGALLSGWRSRVAADPQFAFKVLMEEVVGVSATVFGDMATRPNFGLNELDFVFSTLVVGSILNFTLMYLLAPTMSSGSTTLPFIFANSPTSHMFEPGAYSAVNRLGTFVYKGILFAAVGFAAGLVGTALSNGLIKIRKKMDPGFESPNKAPPTVLNAVTWAIHMGLSANLRYQSLNGIEFLLAKGLPPLLFKSSVFGLRLANNVLGGMTFVMLARVTGSQSAASGEHKVTDE 333
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hetu33g02093 333 PANTHER PROTEIN RETICULATA-RELATED 2, CHLOROPLASTIC-RELATED 38 323 - -
Hetu33g02093 333 Pfam Protein RETICULATA-related 112 279 IPR021825 -
Hetu33g02093 333 MobiDBLite consensus disorder prediction 61 93 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hetu33g02093 - -
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Event-related genes

Select Gene_1 Gene_2 Event_name
300188 Hetu31g02161 Hetu33g02093
301182 Hetu32g02165 Hetu33g02093
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Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
3370902 Hetu Hetu33g02093 Hetu-Chr33:117813530 Hetu34g00546 Hetu-Chr34:36715628
3532376 Hetu Hetu1g00053 Hetu-Chr1:2765603 Hetu33g02093 Hetu-Chr33:117813530
3581215 Hetu Hetu2g00116 Hetu-Chr2:3778154 Hetu33g02093 Hetu-Chr33:117813530
3581233 Hetu Hetu2g00037 Hetu-Chr2:1344030 Hetu33g02093 Hetu-Chr33:117813530
3620626 Hetu Hetu3g00053 Hetu-Chr3:2798331 Hetu33g02093 Hetu-Chr33:117813530
3625248 Hetu Hetu31g02161 Hetu-Chr31:123374268 Hetu33g02093 Hetu-Chr33:117813530
3627193 Hetu Hetu32g02165 Hetu-Chr32:125404587 Hetu33g02093 Hetu-Chr33:117813530