AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hetu33g02214 ATGGGATACGAAAAAGTTCTTAGCGCTTTACGGGAGATTTTTCCAGAGGTTGATTTGTGTAGGCTGAAAGCTATCTCTTTAGAACATCCTAACGATGCTGATGTGGCTGTGGGAGTTGTTCTTGATCTCCCTAAACGTCCACTTACAATTGGTTCTTCAAGTAATAGTCAAAGCTCCCTCAGGTTTTCTGATGGTAATATTTTTCATGCAGATAATGGCAAAAGGAAAGTTGATTCAAGTATGGATCATGTAGTTGTGAATCCTTGTATCGCTGAACATTTAACTAAAGATCATGTTTCAAGCATGGATGGAAGTTTCCGTGGTGCAACGGGAGCTTTAGATGCTGGTTTTTCTACTCAATATACCCGTAATCCATTTGGGGAGCATCACGCTGGAGAAGTAAATGCGGAGAAAGCCATCTTAGCCACTGAATTGAGAGAGCTTCATGTTCGCTTGAATACTTTGTCGGATGATAGAAACAAATCACTTAAAATTCTTGATGAGTTGCAAGAGTTCCTCACGGATCGTGGCCATGTGATTGATATTCTACAAGGAGAGATGGCTGTCAAATGCCAAGATGTGTTACTGCTAAAAGAGAAGTTTGACAAGCGAATCCCACTATCGCGATCACTCTTTTCTAGCCAAACATCAACAATGTTAGTCTCCCCAAATTCATCTTTCAGGATCAGCACACCACCTTTTGAGCATGAGACAGAGACGCATGTGACTCCAAAGAAGAGTTCGGAACATGATGATTTTTATGGTATTCTTGGCAAGATTTCAAGGTTGGACGGATCACCGAGGTCTCCTCATGGAGAAACAAGAAATTCTTCTAGTAACGGTGAAGAAAAAAAGGATGATGACGACGATGAACATAAGGGGTTTTTAGATGATGACGGATGGGAGCTGTTTAACAATGGTGATCTTTTGAACATAAGAAGAGAGGCGTGTTAG 954 41.09 MGYEKVLSALREIFPEVDLCRLKAISLEHPNDADVAVGVVLDLPKRPLTIGSSSNSQSSLRFSDGNIFHADNGKRKVDSSMDHVVVNPCIAEHLTKDHVSSMDGSFRGATGALDAGFSTQYTRNPFGEHHAGEVNAEKAILATELRELHVRLNTLSDDRNKSLKILDELQEFLTDRGHVIDILQGEMAVKCQDVLLLKEKFDKRIPLSRSLFSSQTSTMLVSPNSSFRISTPPFEHETETHVTPKKSSEHDDFYGILGKISRLDGSPRSPHGETRNSSSNGEEKKDDDDDEHKGFLDDDGWELFNNGDLLNIRREAC 317
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hetu33g02214 317 MobiDBLite consensus disorder prediction 234 257 - -
Hetu33g02214 317 PANTHER OS10G0315400 PROTEIN 130 169 - -
Hetu33g02214 317 MobiDBLite consensus disorder prediction 223 299 - -
Hetu33g02214 317 MobiDBLite consensus disorder prediction 277 299 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hetu33g02214 - -
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Event-related genes

Select Gene_1 Gene_2 Event_name
300216 Hetu31g02256 Hetu33g02214
301220 Hetu32g02281 Hetu33g02214
411783 Hetu1g00207 Hetu33g02214
415580 Hetu2g00247 Hetu33g02214
416529 Hetu33g02214 Hetu3g00197
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Hetu Hetu-Chr1:8264718 Hetu33g02214 Hetu-Chr33:125515708 wgd
Hetu Hetu-Chr2:8799157 Hetu33g02214 Hetu-Chr33:125515708 wgd
Hetu Hetu-Chr3:8151496 Hetu33g02214 Hetu-Chr33:125515708 wgd
Hetu Hetu-Chr31:131560433 Hetu33g02214 Hetu-Chr33:125515708 wgd
Hetu Hetu-Chr32:133562326 Hetu33g02214 Hetu-Chr33:125515708 wgd