AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hetu33g02221 ATGGTTGCACCTGTGGCGGTGATGCCGGAGGCGTACGCGAAGGACGCGATAATCTCGTGGTTTCGTGGCGAGTTCGCGGCGGCGAACGCGATAATCGATGCGTTGTGTGGACATTTGTCGCAGTTAGAAGGCGGAAGGTGTGAATATGAGGCGGTGTTTGCGGCGATTCATCGGCGCCGGTTGAATTGGATCCCGATTCTTCAGATGCAGAAGTTTTTTTCGATTGCGGATGTGACGGTGGAGCTGGAGAAGGTCGCGGAGAAGGTGAAGGTGAAGGTGGTGGAGATGAAGCGTGAGATTGTGGTGGAGGAACCGGTGGAAATTATGGATGTTAATGGTGGTGGTGAGGTGGTTGATGACGATTTGTTCAAGGATTATTCGCCGAAAAGCGGGATTACTGATGCAGGTTGGGATGAGATCAGTACCGTATAG 432 52.55 MVAPVAVMPEAYAKDAIISWFRGEFAAANAIIDALCGHLSQLEGGRCEYEAVFAAIHRRRLNWIPILQMQKFFSIADVTVELEKVAEKVKVKVVEMKREIVVEEPVEIMDVNGGGEVVDDDLFKDYSPKSGITDAGWDEISTV 143
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hetu33g02221 143 PANTHER HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY PROTEIN-RELATED 12 90 IPR044842 GO:0003729(InterPro)|GO:0006402(InterPro)|GO:0032451(InterPro)
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hetu33g02221 - -
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Event-related genes

Select Gene_1 Gene_2 Event_name
300221 Hetu31g02268 Hetu33g02221
301226 Hetu32g02296 Hetu33g02221
411795 Hetu1g00221 Hetu33g02221
416533 Hetu33g02221 Hetu3g00212
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Hetu Hetu-Chr33:126231528 Hetu8g03084 Hetu-Chr8:181346865 dispersed
Hetu Hetu-Chr1:8596205 Hetu33g02221 Hetu-Chr33:126231528 wgd
Hetu Hetu-Chr3:8843562 Hetu33g02221 Hetu-Chr33:126231528 wgd
Hetu Hetu-Chr31:132314350 Hetu33g02221 Hetu-Chr33:126231528 wgd
Hetu Hetu-Chr32:134362201 Hetu33g02221 Hetu-Chr33:126231528 wgd