Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Hetu3g00006 | ATGTCTTCTTCATTTCTATTTATCTTTCTCATTACTCTTCACTCTCAAACTCTGAACCAACCTGTCTGCCTGCAATTACTACCATTTCTCCTGCATCCCTTTTGTTCATTTGCGATGGGCAACTACAGGTTCAGATTCTCAAACATCATACCAAACTCATGGTTTTACACTTCTCATAACAACAAAATTACCAAAACACAACCCATCACAACTTCATCTTCTTCATCATCATCTGTATCATCACAACCCGCAATACACCACAGAAAATCCTATTATTTCACTAGAGAGTTAAGTGTACCCGACCCGACGACCACCCCTATTCACGATCGGTCACCTCCCGAACCGCGGAGAAAGTCATCCAAGAAAAAAAGACCTACTACCCCCAAGAAACCAATTCGGCGAAAATTGATTTCTCCTCCGGCAACTGCACGATGCAGCTACCAGGAGTCTGTTAAAACGGACTCCATAGAAATTTTCTCGGATAACGAAGTTTTGTTGCCTGAACAACCAAGACCTGTTGGTTGTTCGTGCACAACAAATTCGTTGAACGAGGAGGTTTATGCGAGAGTTGACCTCCCGCGGATAATAACCAAACCGGTCAAACAGGACGAATTCGGGTCGGGTAAATGGGTGCTTAATGGAGGAAGTCGGATGGGTAGTCCGGTTAGAAAAGCGAAAGGAAACGGTTACTCACCGCGGTTAGGGAACCGGGTTAAGGTAAATGGGATAAGGAGGAGGAACGGGAAGGGGCGGAGCTTGTCCGAAAGTTTGGCGGTTGTGAAAACATCGGCGGATCCCGGGAGGGATTTTAAGGAATCAATGGTTGAGATGATAATGGAGAATAATATTAAGAGTTCAAAAGATTTGGAAGATCTTCTTGCATGTTATCTTGCATTGAATTCTGATGAGTATCATGACTTGATCATCAAGGTATTCAAGCAGATTTGGTTCGAGTGTACTGATATTAGACTGTAG | 975 | 43.59 | MSSSFLFIFLITLHSQTLNQPVCLQLLPFLLHPFCSFAMGNYRFRFSNIIPNSWFYTSHNNKITKTQPITTSSSSSSSVSSQPAIHHRKSYYFTRELSVPDPTTTPIHDRSPPEPRRKSSKKKRPTTPKKPIRRKLISPPATARCSYQESVKTDSIEIFSDNEVLLPEQPRPVGCSCTTNSLNEEVYARVDLPRIITKPVKQDEFGSGKWVLNGGSRMGSPVRKAKGNGYSPRLGNRVKVNGIRRRNGKGRSLSESLAVVKTSADPGRDFKESMVEMIMENNIKSSKDLEDLLACYLALNSDEYHDLIIKVFKQIWFECTDIRL | 324 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Hetu3g00006 | 324 | NCBIfam | uncharacterized plant-specific domain TIGR01568 | 258 | 318 | IPR006458 | - | |
| Hetu3g00006 | 324 | Pfam | Transcriptional repressor, ovate | 263 | 318 | IPR006458 | - | |
| Hetu3g00006 | 324 | MobiDBLite | consensus disorder prediction | 117 | 131 | - | - | |
| Hetu3g00006 | 324 | Pfam | DNA-binding domain | 39 | 82 | IPR025830 | GO:0003677(InterPro) | |
| Hetu3g00006 | 324 | MobiDBLite | consensus disorder prediction | 98 | 145 | - | - | |
| Hetu3g00006 | 324 | PANTHER | TRANSCRIPTION REPRESSOR OFP7-RELATED | 71 | 319 | IPR038933 | GO:0045892(InterPro) | |
| Hetu3g00006 | 324 | ProSiteProfiles | OVATE domain profile. | 259 | 318 | IPR006458 | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Hetu3g00006 | - | - |
| Select | Gene_1 | Gene_2 | Event_name |
|---|---|---|---|
| 268606 | Hetu2g00083 | Hetu3g00006 | |
| 269341 | Hetu3g00006 | Hetu2g00083 |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Hetu | Hetu-Chr2:77075492 | Hetu3g00006 | Hetu-Chr3:370710 | dispersed | |
| Hetu | Hetu-Chr38:80824062 | Hetu3g00006 | Hetu-Chr3:370710 | dispersed | |
| Hetu | Hetu-Chr39:57662338 | Hetu3g00006 | Hetu-Chr3:370710 | dispersed | |
| Hetu | Hetu-Chr3:370710 | Hetu47g04170 | Hetu-Chr47:244377413 | dispersed | |
| Hetu | Hetu-Chr1:529255 | Hetu3g00006 | Hetu-Chr3:370710 | wgd | |
| Hetu | Hetu-Chr2:2652378 | Hetu3g00006 | Hetu-Chr3:370710 | wgd | |
| Hetu | Hetu-Chr2:387040 | Hetu3g00006 | Hetu-Chr3:370710 | wgd |
| Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
|---|---|---|---|---|---|---|---|
| Hetu | Ovate | 4e-24 | No_clan | TF | OFP |