AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hetu3g00048 ATGGAGCATGAAAAGAAGAAGAAACAGAAGAAAAAGAAGAATAAGCAGGGAAAGACAAATGCATCTGCTGGAGTTGGGGAATCGACTTCACAAAATAACAATCATGCAAATGTGGCAAATCCAAATCATCAGAACCTGAATTCCGATAATTCAGATGTCCCGAAATCAGTTGCGGATTCAGATAGAGAGTCCATTAGTGGAACTGAAACATCTCGTTCAGTTGAGGCTGAGAAGTCCTATTGGTTAAACAGAGAGGCTTCCCTAGAACAAAAAATCAGAGAATTGCAAGAGCAGTTGGACATGCACGCACAACGGGAGGTTGATCTTGACAGAAATATTTCACAGTCACAGAAAGAAAGAAACTTATGGCATCATAAAGAGACTGAGCTCGAGGCAACAATTTCACAGTTACAAACTGAAAAACACTCTTGGCTTCAAAAAGAGATGTGCTTTGAAGAAAAACGTATCCAGATGGAAGCTGAAAAGGTTCACTTGGAAGAAAAAGAGAGCTCTGCAACTGAAACAATAGCATCTATGAAAAAGGACAATGCAAAACTACAAGCACAGGTGATTGAGCTGGAAACGTCTATAAAGAATATTTCCCACCAAAATGAGCAGTTGAAAGAACATGTTTCTGATCTTCAGTCTAAGATTCAGGATCTTGAGAATTCTGTAGCAACCCATGTATCTTCTGAAAGGACGAAGCACGCTACCGAATACGAGGACATGAATTCACGGTGGGAATCTGCACAAGCGCTCGTTGCAAAATTGCTTTCTGAAAACGAGAAGTTAGTTGAGAAGGCCGACGCCTTAAAAACCGAGCTTGACCACAAGACCGCAACAACCCAATCATCGTCACTTATTAAACCCGACGATCCGATAGTCAAAAATCCGAAAGCTGCTGACATGGATGAAACATCGGCTCCTGAAACTGGTCCGATTCCATCATCAGCCGAAAAACCAGACACAGTCAGCAATGTAGGCCCACTATCTGGATCCAAAGAAGGAATGCCGTCAGATAAACTTGTGTATCATATGAATTCACGGGGTTCTGATTTGAATCAAATATCTCAAGGAAGCATGGAGTCTGGAGAAATAGTGCAGATTTCGTTAACCGAGAATGATGCCACATCAGCAACCTCTGTTACCGAGAACTCCGACGCGGTGCCTCTAACAGACGCTCCTCTCATCGGTGCTCCATTCAGGTTGATATCGTTTGTTGCGAGATACGTGAGTGGGGCCGACTTGGTTCAGAAGTAA 1260 42.78 MEHEKKKKQKKKKNKQGKTNASAGVGESTSQNNNHANVANPNHQNLNSDNSDVPKSVADSDRESISGTETSRSVEAEKSYWLNREASLEQKIRELQEQLDMHAQREVDLDRNISQSQKERNLWHHKETELEATISQLQTEKHSWLQKEMCFEEKRIQMEAEKVHLEEKESSATETIASMKKDNAKLQAQVIELETSIKNISHQNEQLKEHVSDLQSKIQDLENSVATHVSSERTKHATEYEDMNSRWESAQALVAKLLSENEKLVEKADALKTELDHKTATTQSSSLIKPDDPIVKNPKAADMDETSAPETGPIPSSAEKPDTVSNVGPLSGSKEGMPSDKLVYHMNSRGSDLNQISQGSMESGEIVQISLTENDATSATSVTENSDAVPLTDAPLIGAPFRLISFVARYVSGADLVQK 419
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hetu3g00048 419 Coils Coil 176 224 - -
Hetu3g00048 419 MobiDBLite consensus disorder prediction 310 332 - -
Hetu3g00048 419 MobiDBLite consensus disorder prediction 61 77 - -
Hetu3g00048 419 MobiDBLite consensus disorder prediction 1 17 - -
Hetu3g00048 419 Coils Coil 254 281 - -
Hetu3g00048 419 Coils Coil 78 112 - -
Hetu3g00048 419 Gene3D - 166 283 - -
Hetu3g00048 419 MobiDBLite consensus disorder prediction 1 82 - -
Hetu3g00048 419 MobiDBLite consensus disorder prediction 276 341 - -
Hetu3g00048 419 MobiDBLite consensus disorder prediction 18 54 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hetu3g00048 - -
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Event-related genes

Select Gene_1 Gene_2 Event_name
268616 Hetu2g00106 Hetu3g00048
269351 Hetu3g00048 Hetu2g00106
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Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
3530483 Hetu Hetu1g00030 Hetu-Chr1:1423423 Hetu3g00048 Hetu-Chr3:2582214
3579762 Hetu Hetu2g00106 Hetu-Chr2:3559681 Hetu3g00048 Hetu-Chr3:2582214
3580301 Hetu Hetu2g00032 Hetu-Chr2:1017754 Hetu3g00048 Hetu-Chr3:2582214