AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hetu3g00067 ATGTTCCTTTGTGGGAACTTCTGTGGCGTCGGTGTTTGCACTGTCACTGACGTCAAAGTTAACGCTAAAGGTTTTATATGCGCTTGTGTAGCTGTTTTCGCGACATCATTGCAACAAATTTTGTTCATACTCCTTTCATGCTCCTTGGCGGTTTTCTGCAACATTAGCCAGTATCTTTGCATAGGGCGATTTTCAGCCGTTTCGTTTCAAGTTTTGGGTCATATGAAAACCGTGTGTGTTTTGACTTTGGGTTGGCTTTTGTTTGACTCAGAGTTGACTTTCAAGAACATTATGGGGATGCTTGTTGCTGTTGGTGGCATGGTGATCTATAGTTGGGCAGTGGAAGTTGAAAAGGCTGATAGCAAAGCAACACTAGTTGTTCAAAACAGTTTAACAGAAGAGGAACTCAATTTGTTGAAAGATGGAATGGAAGATCATACAGTCAAGCTTGGTGAATCTAAAGAAACACAAGTTTTTGAAATTTGA 486 40.53 MFLCGNFCGVGVCTVTDVKVNAKGFICACVAVFATSLQQILFILLSCSLAVFCNISQYLCIGRFSAVSFQVLGHMKTVCVLTLGWLLFDSELTFKNIMGMLVAVGGMVIYSWAVEVEKADSKATLVVQNSLTEEELNLLKDGMEDHTVKLGESKETQVFEI 161
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hetu3g00067 161 PANTHER SOLUTE CARRIER FAMILY 35 38 113 IPR050186 GO:0005338(PANTHER)|GO:0005459(PANTHER)|GO:0005794(PANTHER)|GO:0015297(PANTHER)
Hetu3g00067 161 SUPERFAMILY Multidrug resistance efflux transporter EmrE 35 112 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hetu3g00067 - -
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Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
3390301 Hetu Hetu3g00067 Hetu-Chr3:3274509 Hetu46g02904 Hetu-Chr46:172174779
3530499 Hetu Hetu1g00071 Hetu-Chr1:3324584 Hetu3g00067 Hetu-Chr3:3274509
3579778 Hetu Hetu2g00132 Hetu-Chr2:4174228 Hetu3g00067 Hetu-Chr3:3274509
3580316 Hetu Hetu2g00053 Hetu-Chr2:1790315 Hetu3g00067 Hetu-Chr3:3274509