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AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hetu3g00073 ATGCTATATATGATCTTTTCGAAAGCCTGTATTCATCAATATGCATTGTTAACTCTGGAGAATTATGCAGGTTTTTGTGGTGAAATTACTATGGAGATGCAGATGCAAGATGAATCATTTCTGAATCCAGCGGTTAAAGCAACACTTTGTCTTGGATCAGAAACGCATACGATTGAAGCTTGCAAGGGTATTCTTTCAGACCAGTTGGTTTATATAAAAGGAGAAAGTATGAACGTATTGAAAGAATTCATCACCAAGCATAACGTTCCAAATGATGTCCCAGATGAAATAGTGTGCGAAGGCGATGCTGATGATGATGACGAGGCGCCCGTTGTCAAGTCAAAGAAGATTAGAACAGAGAAATAG 366 38.52 MLYMIFSKACIHQYALLTLENYAGFCGEITMEMQMQDESFLNPAVKATLCLGSETHTIEACKGILSDQLVYIKGESMNVLKEFITKHNVPNDVPDEIVCEGDADDDDEAPVVKSKKIRTEK 121
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hetu3g00073 121 PANTHER T2E6.7-RELATED 30 118 - -
Hetu3g00073 121 MobiDBLite consensus disorder prediction 99 121 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hetu3g00073 - -
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Event-related genes

Select Gene_1 Gene_2 Event_name
268628 Hetu2g00137 Hetu3g00073
269363 Hetu3g00073 Hetu2g00137
416253 Hetu31g02179 Hetu3g00073
416399 Hetu32g02187 Hetu3g00073
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Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
3530504 Hetu Hetu1g00079 Hetu-Chr1:3392148 Hetu3g00073 Hetu-Chr3:3324387
3579783 Hetu Hetu2g00137 Hetu-Chr2:4204829 Hetu3g00073 Hetu-Chr3:3324387
3580321 Hetu Hetu2g00058 Hetu-Chr2:1820891 Hetu3g00073 Hetu-Chr3:3324387
3620033 Hetu Hetu3g00073 Hetu-Chr3:3324387 Hetu31g02179 Hetu-Chr31:124711922
3620321 Hetu Hetu3g00073 Hetu-Chr3:3324387 Hetu32g02187 Hetu-Chr32:126851792
3620632 Hetu Hetu3g00073 Hetu-Chr3:3324387 Hetu33g02125 Hetu-Chr33:119219717