AGRP
Asteraceae Genomic Research Platform
Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Hetu3g00109 | ATGTCTCTACTAACCCTACTCTTCTTCATCTTCCTCATCCTTTCATCTCCACCACTCATCTCATCCACCACCACCACCCCACCAACCGCCTACGAAGCCCTCGAATCCTACGGTTTTCCACCCGGTCTACTTCCGGTCGGGGTCACCGGCTACACCCTGGACGAACAAACCGGCAACTTCGAGGTGTACATAGGGCAGACATGTAAGTACACCGTTCAAGGCTACAACCTCAAATACGAGTCAACTATTAGTGGAGTTATTAGCCAAAACAAGCTCACCAAACTCAAGGGTATTAGTGTCAAAGTGTTGTTCGTTTGGTTGAGTATCGTTGAAGTGTCACGTGATGGTGATGAGTTGTATTTGTCGGTTGGGATTTTGTCGGCTGCGTTTGATATTACTGGGTTTGTTGAGTCCCCGCAGTGTGGGTGTGGGTTTGATTGTAACGATGTTGGAAGCGTGAAGATTAAGGAAGATGGGTTGTTAAGGTCTGTTTGGTAG | 498 | 47.79 | MSLLTLLFFIFLILSSPPLISSTTTTPPTAYEALESYGFPPGLLPVGVTGYTLDEQTGNFEVYIGQTCKYTVQGYNLKYESTISGVISQNKLTKLKGISVKVLFVWLSIVEVSRDGDELYLSVGILSAAFDITGFVESPQCGCGFDCNDVGSVKIKEDGLLRSVW | 165 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Hetu3g00109 | 165 | Pfam | Protein of unknown function, DUF538 | 30 | 135 | IPR007493 | - | |
| Hetu3g00109 | 165 | Gene3D | - | 19 | 138 | IPR036758 | - | |
| Hetu3g00109 | 165 | PANTHER | T31J12.3 PROTEIN-RELATED | 22 | 142 | IPR007493 | - | |
| Hetu3g00109 | 165 | SUPERFAMILY | At5g01610-like | 4 | 147 | IPR036758 | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Hetu3g00109 | - | - |
| Select | Gene_1 | Gene_2 | Event_name |
|---|---|---|---|
| 111126 | Hetu30g00532 | Hetu3g00109 | |
| 268642 | Hetu2g00171 | Hetu3g00109 | |
| 269377 | Hetu3g00109 | Hetu2g00171 |
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| 3297483 | Hetu | Hetu11g01497 | Hetu-Chr11:61834871 | Hetu3g00109 | Hetu-Chr3:4226559 | |
| 3359868 | Hetu | Hetu30g00595 | Hetu-Chr30:32983722 | Hetu3g00109 | Hetu-Chr3:4226559 | |
| 3359869 | Hetu | Hetu30g00596 | Hetu-Chr30:33036800 | Hetu3g00109 | Hetu-Chr3:4226559 | |
| 3390331 | Hetu | Hetu3g00109 | Hetu-Chr3:4226559 | Hetu45g02995 | Hetu-Chr45:164730196 | |
| 3530526 | Hetu | Hetu1g00112 | Hetu-Chr1:4385688 | Hetu3g00109 | Hetu-Chr3:4226559 | |
| 3538519 | Hetu | Hetu10g01492 | Hetu-Chr10:65303937 | Hetu3g00109 | Hetu-Chr3:4226559 | |
| 3543940 | Hetu | Hetu11g01493 | Hetu-Chr11:61806391 | Hetu3g00109 | Hetu-Chr3:4226559 | |
| 3579805 | Hetu | Hetu2g00171 | Hetu-Chr2:5384393 | Hetu3g00109 | Hetu-Chr3:4226559 |