Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Hetu3g00212 | ATGTCGCAGCCAGCGACCGCGGCAGTGATGCCAGAGGCATTCGCTAAGGACGCGATAATCTCGTGGTTCCGAGGCGAATTCGCTGCGGCAAACGCAATAATCGACGCTTTGTGCGGGCATTTGTCGCAATTTGAAGGCGGTAAAGGCGAGTATGAATCGGTGTTTTCGGCTATACATCGACGCCGGTTGAATTGGATTCCGATTCTTCAGATGCAGAAGTATTATTCCATCGCCGATGTGACGATGGAACTACAGAACGTCGTCGAGAAAAAAATTGTTGAAGAAAAGGTGGAGACTAAAGGTGAAATTTCAGAAATGGATTCCGTTTACATCGATATCGATAAGAATAATGGTGGTGAAGTTGTGGATGATGATTCCAATAAAGATAATCATTCACCAAAGAGTGGGATCACTGATGCAGGACTACAGGAAGTGCAATCAGCGGGGGAAAGCGTCGAGATATGCTCAAACGAAGAAGACTGGGAGGCGCGACGTGCTGAAATCAAGATGACAAAAGGGTTCATAGCCAAGGAGTCTGTAAAAGGGCATATGGTGAATGTTGTGAGAGGTCTGAAGATGTATGAGGACATACTCAACGCGACAGAGCTCTCTAAGTTGACTGAATACGTAACTGAACTTCGTGTCGCTGGCCAAAATGGTGAACTCTCAGGTGAGACTTTTATCATGTATAATCAGCAGTCAAAGGCAATCAAAAGAGAGCTTATTCAGTTTGGAGCTCCAATATTTGGACAAATTAAAGATGAGGCTACAAATAATAAATCCCAAGAGAGCAATATCGAGCCGATTCCTGCTCCTCTTGAAGGTGTGATTGACCACCTAATTCAGTTTCACTTGATTTCCGAAAACAGACGACCAAACAGTTGCATTATAAACTTTTTCGACGAGGGGGAATTTTCACAGCCTTTCTTGAAACCACCTCATTTAGAGCAACCCATAGCTACACTTGTTATGTCTGATTCAACAATGGCTTTTGGGCGTACTCTAGTTTGTGATAATGATGGAAACTACAAAGGACCACTTATGCTTTCCCTTAAGGAAGGGTCACTCTTAGTGATGAGAGGAAATAGTGCTGACATGGCACGCCACGTCATGTGTCAATCTCCGACTAAACGAATCAGTGTCTCATTTTTCAAAGTCCGAATAGACACCTATGACAAAAATTTAGCCCCAAAAGATCCGATGAGTGGAACGATGACCCTATGGCAACCTAGTCTTACAACTCCATTAATGACACCGATTACTACGGGACCACTAGATGGGTATGATGCAATCCACGTTCTCCCCAAGTGGGGTGCAATTCGATCCCCACAGCTGCTTATGTTAGCACCAGTCCGTCCAATGGTTATGAGCCCTAGAAGGCTGCCACGTGGAGGGACTGGTGTTTTCTTACCATGGAATGGGGGGTCAAAAAAACCCAACAAGCATGTACCGCCTCGTGCTCAAAGAGGGCGTCTTCTTGCACTTCACGCCTCAACTGAAACACACAAAATGGATCGAACCCCTGAGTCGGGCATTAGCGTGGCTTGA | 1548 | 45.41 | MSQPATAAVMPEAFAKDAIISWFRGEFAAANAIIDALCGHLSQFEGGKGEYESVFSAIHRRRLNWIPILQMQKYYSIADVTMELQNVVEKKIVEEKVETKGEISEMDSVYIDIDKNNGGEVVDDDSNKDNHSPKSGITDAGLQEVQSAGESVEICSNEEDWEARRAEIKMTKGFIAKESVKGHMVNVVRGLKMYEDILNATELSKLTEYVTELRVAGQNGELSGETFIMYNQQSKAIKRELIQFGAPIFGQIKDEATNNKSQESNIEPIPAPLEGVIDHLIQFHLISENRRPNSCIINFFDEGEFSQPFLKPPHLEQPIATLVMSDSTMAFGRTLVCDNDGNYKGPLMLSLKEGSLLVMRGNSADMARHVMCQSPTKRISVSFFKVRIDTYDKNLAPKDPMSGTMTLWQPSLTTPLMTPITTGPLDGYDAIHVLPKWGAIRSPQLLMLAPVRPMVMSPRRLPRGGTGVFLPWNGGSKKPNKHVPPRAQRGRLLALHASTETHKMDRTPESGISVA | 515 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Hetu3g00212 | 515 | MobiDBLite | consensus disorder prediction | 496 | 515 | - | - | |
| Hetu3g00212 | 515 | MobiDBLite | consensus disorder prediction | 116 | 138 | - | - | |
| Hetu3g00212 | 515 | SUPERFAMILY | Clavaminate synthase-like | 183 | 383 | - | - | |
| Hetu3g00212 | 515 | PANTHER | HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY PROTEIN-RELATED | 13 | 503 | IPR044842 | GO:0003729(InterPro)|GO:0006402(InterPro)|GO:0032451(InterPro) | |
| Hetu3g00212 | 515 | MobiDBLite | consensus disorder prediction | 117 | 132 | - | - | |
| Hetu3g00212 | 515 | Gene3D | - | 175 | 391 | IPR037151 | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Hetu3g00212 | K10767 | mRNA N6-methyladenine demethylase [EC:1.14.11.53] |
| Select | Gene_1 | Gene_2 | Event_name |
|---|---|---|---|
| 416264 | Hetu31g02268 | Hetu3g00212 | |
| 416411 | Hetu32g02296 | Hetu3g00212 | |
| 416533 | Hetu33g02221 | Hetu3g00212 |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Hetu | Hetu-Chr3:8843562 | Hetu47g03163 | Hetu-Chr47:198125551 | dispersed | |
| Hetu | Hetu-Chr1:8596205 | Hetu3g00212 | Hetu-Chr3:8843562 | wgd | |
| Hetu | Hetu-Chr10:70713240 | Hetu3g00212 | Hetu-Chr3:8843562 | wgd | |
| Hetu | Hetu-Chr12:56939946 | Hetu3g00212 | Hetu-Chr3:8843562 | wgd | |
| Hetu | Hetu-Chr3:8843562 | Hetu31g02268 | Hetu-Chr31:132314350 | wgd | |
| Hetu | Hetu-Chr3:8843562 | Hetu32g02296 | Hetu-Chr32:134362201 | wgd | |
| Hetu | Hetu-Chr3:8843562 | Hetu33g02221 | Hetu-Chr33:126231528 | wgd |