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AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hetu3g00222 ATGTCATCGGTTATGGCCGGACAACAACGCGATCATCAAAGTGTCGAGTTTCACGAGTCAGGAACCGAAGGATTGCCTTGGCTTCCGACTTACATCCTCAACGACGGTGTGGAAACATGTGCAAATTATTTAGAAGACGATTATCGTTTGTTTTCAAAGGAACGGAATATTATTAAAGAGAAGAGACATCATCAACCTTCATCATGCCGGAAGTCACAGGCACAACCTCCTTTGCTTCCGTCACCACCGAATTATTCAAAGCCGGATCAAAAAACCAAATATCCTACAAATTGGGCAGCTGGTGGACCTGGTATGCAAGCTGTGTTTCTAGCTTCTGGCCAAAGATCTGGTGGTACAGGAGTATTTCTTCCTCGTACAGCGGGAACCGATGTTGAAAACCCCAGAAAACCAGAACATAACAATAATGTGAAGGGATTAGAATGCGATCGGATTAGAACTAAGAAGAACAGGGATATGTCAAGCCAAACATGCGTCATCACTCAAAACCGAAGTTCTTCACCTGAAATATTTCTCCCGAAAGAGTGGACTTACTAA 555 43.6 MSSVMAGQQRDHQSVEFHESGTEGLPWLPTYILNDGVETCANYLEDDYRLFSKERNIIKEKRHHQPSSCRKSQAQPPLLPSPPNYSKPDQKTKYPTNWAAGGPGMQAVFLASGQRSGGTGVFLPRTAGTDVENPRKPEHNNNVKGLECDRIRTKKNRDMSSQTCVITQNRSSSPEIFLPKEWTY 184
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hetu3g00222 184 MobiDBLite consensus disorder prediction 60 93 - -
Hetu3g00222 184 PANTHER TIP41-LIKE PROTEIN 69 184 - -
Hetu3g00222 184 MobiDBLite consensus disorder prediction 1 20 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hetu3g00222 - -
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Event-related genes

Select Gene_1 Gene_2 Event_name
268675 Hetu2g00254 Hetu3g00222
269411 Hetu3g00222 Hetu2g00254
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Hetu Hetu-Chr1:8968505 Hetu3g00222 Hetu-Chr3:9297637 wgd
Hetu Hetu-Chr2:9153742 Hetu3g00222 Hetu-Chr3:9297637 wgd