AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hetu3g00264 ATGGTGTTGTATACCGAATCTTTATCGACACCACCACAGGCTACACGGGCTACTTGTTTTGACGACGGAAGCTACACAGTGGAAAAGAAGACCATACCGAAATCATCGAATTCTGATACACCAAACCCGCCTTTGTACATTGTTTACCCTACCGAAAAAGGGTCTTTTCCCGTTATACTCTTTCTCCATGGCTTTTCGATCCCTAATACATGTTATTGCGACCTCTTCGAGTTTATTGCCTCTCATGGTTACATTATCGTCGCTCCTGGTCAGACTTTGGTATTATACTTTATATATTTTGAGCTCTTGAAAGGTCTATGTGCATTTTCTGCTGTTGATGACGTGGACAATGCAGCTGAAGCAGCCAACTGGATAAACAAAAACCAAGGCGAAAACCTTCGACTTGTACTCCCAAATGATGTATCACCAGATCTTGAAAATGTAGCACTAGCCGGTCATAGTAAAGGAGGAAAAGCAGCATTTGCACTAGCACTAGGCCATGCTAATACGAGCCTTAAATTCAAGGCTCTTATCGGTTTAGATCCTGTTGCAGGCCGAGATACATCCAACAGGCTCGAACCCAAGATCTTAAACTACATACCCCAAAATTTTAAAATATCCATGCCTATAGCCCTAATTGGAACAGGCTTGGGTGATGATGGGTGTTGCGGGTGTTTTCCACCCGCAGCCCCTTGGGGATGTAACCATCCTTTTTTCTTTAACGAGTGCAAACCCCCTGTGTGTTATTTTGTAGCCAAGGACTTTGGTCACATGGACATGGTTGATGATTGGTTGATCAGGTTGTCGGGTATGTTTGTATGCAAGACTGGGAAGGGTTCGTATGCTGATATGAGAAGAGCTTGCGGAGGCGTTTTTGTTGCCTTTCTCAAGACTTATATGTTTGATGATGCCGAAGATCTCACCACTATTGTTGATTCACCCGGTACATTTGCTCCAGTTAAGCTCGATCCAGTTTTATGGCTTCGATCATGA 993 43.71 MVLYTESLSTPPQATRATCFDDGSYTVEKKTIPKSSNSDTPNPPLYIVYPTEKGSFPVILFLHGFSIPNTCYCDLFEFIASHGYIIVAPGQTLVLYFIYFELLKGLCAFSAVDDVDNAAEAANWINKNQGENLRLVLPNDVSPDLENVALAGHSKGGKAAFALALGHANTSLKFKALIGLDPVAGRDTSNRLEPKILNYIPQNFKISMPIALIGTGLGDDGCCGCFPPAAPWGCNHPFFFNECKPPVCYFVAKDFGHMDMVDDWLIRLSGMFVCKTGKGSYADMRRACGGVFVAFLKTYMFDDAEDLTTIVDSPGTFAPVKLDPVLWLRS 330
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hetu3g00264 330 Gene3D alpha-beta hydrolase 7 314 IPR029058 -
Hetu3g00264 330 Pfam Chlorophyllase 17 323 IPR017395 -
Hetu3g00264 330 PANTHER CHLOROPHYLLASE-2, CHLOROPLASTIC 6 326 - -
Hetu3g00264 330 SUPERFAMILY alpha-beta-Hydrolases 37 264 IPR029058 -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hetu3g00264 K08099 chlorophyllase [EC:3.1.1.14]
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Event-related genes

Select Gene_1 Gene_2 Event_name
268694 Hetu2g00278 Hetu3g00264
269430 Hetu3g00264 Hetu2g00278
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Hetu Hetu-Chr35:189850848 Hetu3g00264 Hetu-Chr3:10787996 dispersed
Hetu Hetu-Chr3:10787996 Hetu3g00267 Hetu-Chr3:10903808 dispersed
Hetu Hetu-Chr3:10787996 Hetu3g00266 Hetu-Chr3:10854761 proximal
Hetu Hetu-Chr1:10775181 Hetu3g00264 Hetu-Chr3:10787996 wgd
Hetu Hetu-Chr2:9835929 Hetu3g00264 Hetu-Chr3:10787996 wgd