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AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hetu3g00321 ATGGCGAGTTACGCCGCGGTATTAGCCCTCTTTTGCACCATTCTATCCATCGTTGGTCCGGCCACTTGTCGCGCCACAACCGCCACCTCACCCAACAACTCCTCCCCCCCTTCTGCCCCCTTAACCGCCTCCGAATCATTTGTGATCAAAGGGAAGGTTTATTGTGATCCGTGCCGAATCCAATTCCCTACCAAAATCAGCTACCCTGTCCCCAACACAAAAGTTGTCCTGCGTTGCCGTCAACGCGAATCAGGGACTGAAACGACGAAGGTCGAGGGAAAGAGTGACGCTAACGGCATGTATAGCATTACTGCGACGGGTGATCATGAGGAGGAGATTTGTGATGTGAGGATTACTGAGAGTCCTGATAGTAAGTGTCCTGAGGTTATGGATGATGAGAGCATTGCTCGGGTCTCGTTGACCGATAAAAATGGCGTTCGAGGGAAGACTCGAGTGGTGAATCCGATTGGGTTTATGGTTAAAGAGATTGATCCGCGCTGCAAAGAGATTCTTGCAGAGATTGGTATTATGGGTATTTAA 540 50.0 MASYAAVLALFCTILSIVGPATCRATTATSPNNSSPPSAPLTASESFVIKGKVYCDPCRIQFPTKISYPVPNTKVVLRCRQRESGTETTKVEGKSDANGMYSITATGDHEEEICDVRITESPDSKCPEVMDDESIARVSLTDKNGVRGKTRVVNPIGFMVKEIDPRCKEILAEIGIMGI 179
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hetu3g00321 179 PANTHER PROTEIN DOWNSTREAM OF FLC-RELATED 10 175 IPR006041 -
Hetu3g00321 179 Pfam Pollen protein Ole e 1 like 49 132 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hetu3g00321 - -
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Event-related genes

Select Gene_1 Gene_2 Event_name
104266 Hetu10g01649 Hetu3g00321
104859 Hetu11g01630 Hetu3g00321
105345 Hetu12g01453 Hetu3g00321
268709 Hetu2g00315 Hetu3g00321
269445 Hetu3g00321 Hetu2g00315
416236 Hetu31g02083 Hetu3g00321
416382 Hetu32g02094 Hetu3g00321
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Hetu Hetu-Chr1:15720963 Hetu3g00321 Hetu-Chr3:13173051 wgd
Hetu Hetu-Chr10:72538653 Hetu3g00321 Hetu-Chr3:13173051 wgd
Hetu Hetu-Chr11:68174679 Hetu3g00321 Hetu-Chr3:13173051 wgd
Hetu Hetu-Chr12:62053601 Hetu3g00321 Hetu-Chr3:13173051 wgd
Hetu Hetu-Chr2:12232925 Hetu3g00321 Hetu-Chr3:13173051 wgd
Hetu Hetu-Chr3:13173051 Hetu31g02083 Hetu-Chr31:118536290 wgd
Hetu Hetu-Chr3:13173051 Hetu32g02094 Hetu-Chr32:119629394 wgd