Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Hetu3g01381 | ATGGCGGAAGAGTTGGTGTTGGACACAGCGATCAGAGACTGGGTCCTAATCCCCTTATCAGTAGTCATGGTTCTCATCGGAATCCTCCGCTACTTTGTCTCCAAGCTCATGCGCACTTCTCAACTGCCTGATTCCAAAATCATCAAAGAAGGGCAGGTGATAATTAGGGCTCGAAATCTACGTGCGGCTGCTAATTTCATACCTGTGAAGGCGTTTCGTGCTCGGAAAGTTTATTATACCAATGAGTCTATGAGATTGAATATTGGTTATGAGGCTGGATTTGATGTTTCCAAAGAGTCCAAATTTGTTGACATATTTGTTAGTAACATTGACCAAAATAGTGAAAAGATTATGAATGGTTTAATTGCTTTTGGTTGTACGACATTGCTCTTGCATTTGCAGGAAAACGGTTTACTTCATGTTCCCAAGGGCCAGGCTCAGAATCCACAAGCACAAATGTTTTCTGATCCAAACATGGCTATGGATATGATGAAGAAGAATCTTTCCATGATCATACCACAGACCCTCACTTTTGCATGGGTTAACTTCTTCTTCTCCGGGTTCGTAGCAGCAAAGATCCCTTTTCCACTGACTCAGAGGTTTAGATCCATGCTACAGAACGGGATTGATTTGAGTACTGTTGATGTCAGCTACGTTAGCAGTCGTTCTTGGTACTTTCTTAATCTGTTTGGATTGAGAGGTTTGTTTAGTCTCATTTTGGGAGAGGAAAATGCCACAGACGATACACAGCGTATGATGCAAATGAGTGGATTTGGCTTTGACCCATCAAAGAGTTTAGGTGCGGAAAAAGACGGTTTAGATATAGTTCAGCATGATTGGGTCCTTCCGAAATTCGAGCAACGTGCCGAAGCCGTGCTCAGAAAACGCCTTAGCAGCTAA | 900 | 42.78 | MAEELVLDTAIRDWVLIPLSVVMVLIGILRYFVSKLMRTSQLPDSKIIKEGQVIIRARNLRAAANFIPVKAFRARKVYYTNESMRLNIGYEAGFDVSKESKFVDIFVSNIDQNSEKIMNGLIAFGCTTLLLHLQENGLLHVPKGQAQNPQAQMFSDPNMAMDMMKKNLSMIIPQTLTFAWVNFFFSGFVAAKIPFPLTQRFRSMLQNGIDLSTVDVSYVSSRSWYFLNLFGLRGLFSLILGEENATDDTQRMMQMSGFGFDPSKSLGAEKDGLDIVQHDWVLPKFEQRAEAVLRKRLSS | 299 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Hetu3g01381 | 299 | PIRSF | TMP-111 | 107 | 296 | IPR008568 | GO:0016020(InterPro) | |
| Hetu3g01381 | 299 | PIRSF | TMP-111 | 1 | 123 | IPR008568 | GO:0016020(InterPro) | |
| Hetu3g01381 | 299 | PANTHER | UNCHARACTERIZED | 130 | 296 | IPR008568 | GO:0016020(InterPro)|GO:0034975(PANTHER)|GO:0072546(PANTHER) | |
| Hetu3g01381 | 299 | Pfam | Integral membrane protein EMC3-TMCO1-like | 4 | 244 | IPR002809 | GO:0016020(InterPro) | |
| Hetu3g01381 | 299 | SMART | DUF106-2 | 4 | 244 | IPR002809 | GO:0016020(InterPro) |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Hetu3g01381 | K23564 | ER membrane protein complex subunit 3 |
| Select | Gene_1 | Gene_2 | Event_name |
|---|---|---|---|
| 268117 | Hetu2g01355 | Hetu3g01381 | |
| 416274 | Hetu31g02403 | Hetu3g01381 | |
| 416421 | Hetu32g02413 | Hetu3g01381 | |
| 416544 | Hetu33g02322 | Hetu3g01381 |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Hetu | Hetu-Chr31:140346118 | Hetu3g01381 | Hetu-Chr3:75353249 | dispersed | |
| Hetu | Hetu-Chr32:142080712 | Hetu3g01381 | Hetu-Chr3:75353249 | dispersed | |
| Hetu | Hetu-Chr33:133429920 | Hetu3g01381 | Hetu-Chr3:75353249 | dispersed | |
| Hetu | Hetu-Chr3:75353249 | Hetu9g03027 | Hetu-Chr9:159833637 | dispersed | |
| Hetu | Hetu-Chr1:85828482 | Hetu3g01381 | Hetu-Chr3:75353249 | wgd | |
| Hetu | Hetu-Chr2:75885820 | Hetu3g01381 | Hetu-Chr3:75353249 | wgd |