AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hetu3g01571 ATGGAGGAGAACCCTCTTCACCTGAATCCAAACCTCCACTATTCCATCATCAACATCCTGGAATCTAAGTCCTTGTCATGGATCTTCATTGCAGATCACCGTCACCCATGGCGAGCAACACTCTCATGGATCATCTTCTCCCTCTTAACTTTTGCGCTTCCGGTTTTCTCCCACTTGGCTCTTCAGCGCCCCGTGTATCATCACGATCACCTCCGGCCTTTCGATTGGATCGTTCAAGTGTCTCTTTCGTTGTTTTCCACGTTGTCCTTCGTTAGTCTCTGGCGGTTTACTCGGAAGTACGGTCTCCGCCGGTTTCTGTTTCTTGATAAGTTGGATAGCCTTGGTGATAAAGTTGGACGAAAGTATTTAGAGGAGGTTCAGAAGAATACCTACATAGATAGCTATGTAGTCAAAAGCAGATCCACAATGCTTCTATGTGCTTTCATCTTCCCATGTTTTGTTTGTGACGTTATTTACAACATATGGTGGTTCACCTCAGGAGGGGCCCACATACCCTACATTTACAACCTGTACCTTAGTCATGCCATAGCATGCTTGATACACCTGACTTGTTGGTTATACCGGACATCACTATTCTTGCTTGTTTGTGTTCTTTTCAAACTCACATGTTCTCTACAAATACTTAGGCTGGAAGATTTTGCTCACGTGTTTGAAAAGTTATCTGATGTGGGCCCAATATTGGTCCAACACCTCACCATCAAAAGAAACCTCCGCGTTATAAGCCATAGGTTTCGTGCGTTTATCTTGTTGACATTAATACTGGTGACAACAAGCCAGTTCGCTTCTCTGCTTGTTACAACTGTGGACGGCGCAGTTGTAAATGTATCTACCACTGGAGAACTCGCGTTATGCTCTGTTACGCTTGTGTTTGGTCTGTATATATGCCAACGCAGTGCAGCAAAGATCACACACAAAGCTCAGTCCTTGACAAGCTTGGCCACTAAATGGCATATTTGTGCTACCACCCACAATTTTGTTGATATGGGCAACAATGATGAAAACCCAAGGGATAATATTACTCCACGAATGGCCGATCTGGATTCAGAAAATGAGGTTGGAGATGGTGATGATGAACTAGACAACACAAACTTCATTCCGGTTTATAAGAACACAATTTCATACCAACAAAGACAAGCTTTAGTGACATATTTTGAGAACAATGAAACTGGAATCACGGTGTATGGGTTCATGTTAGACAGGTCATCTATAAACACGGTCTTTGCAATTCAATTGTCACTTGCGCTATGGGGGTTGTTCGATAAGACAATTGGCTTTGGTTGA 1302 43.24 MEENPLHLNPNLHYSIINILESKSLSWIFIADHRHPWRATLSWIIFSLLTFALPVFSHLALQRPVYHHDHLRPFDWIVQVSLSLFSTLSFVSLWRFTRKYGLRRFLFLDKLDSLGDKVGRKYLEEVQKNTYIDSYVVKSRSTMLLCAFIFPCFVCDVIYNIWWFTSGGAHIPYIYNLYLSHAIACLIHLTCWLYRTSLFLLVCVLFKLTCSLQILRLEDFAHVFEKLSDVGPILVQHLTIKRNLRVISHRFRAFILLTLILVTTSQFASLLVTTVDGAVVNVSTTGELALCSVTLVFGLYICQRSAAKITHKAQSLTSLATKWHICATTHNFVDMGNNDENPRDNITPRMADLDSENEVGDGDDELDNTNFIPVYKNTISYQQRQALVTYFENNETGITVYGFMLDRSSINTVFAIQLSLALWGLFDKTIGFG 433
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hetu3g01571 433 PANTHER RAS GUANINE NUCLEOTIDE EXCHANGE FACTOR K 23 431 IPR021924 -
Hetu3g01571 433 Pfam Protein of unknown function (DUF3537) 24 416 IPR021924 -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hetu3g01571 - -
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Hetu Hetu-Chr2:86039794 Hetu3g01571 Hetu-Chr3:90003515 dispersed
Hetu Hetu-Chr3:90003515 Hetu44g02339 Hetu-Chr44:130925437 dispersed
Hetu Hetu-Chr1:96408223 Hetu3g01571 Hetu-Chr3:90003515 wgd
Hetu Hetu-Chr2:86029262 Hetu3g01571 Hetu-Chr3:90003515 wgd