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AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hetu46g00872 ATGTCATTAAACAGAGGTAGATCGTGCAATCCAACAGTGGTGAAGGTCGGAATAATATTATTGGGTGTGTGTCTGGTGGGTTATTTGGTGGGCCCACCTTTATACTGGCATGTTCTTGAAGGTTTAGCCGCCGTCCGCCGGTCCTCCGCCGGCGTGTCCTGCCCTACATGCAACTGCGACTGTGATTCTCAGCCCCTTCTCTCCATTCCTCAAGCTCTAAGCAATGGTTCTTTCACAGATTGTGCAAAGCATGATCCTGAAGTGAATGGAGAAACCGAAAAGAATTTCGCAGACCTTTTATCAGAGGAACTAAGGTTACGCGAAGCTGAAGCATTAGAAAGCCAACAACATGCTGACATGGCACTTCTCGAGGCGAAGAAGCTGACATCACAATATCAAAAAGAAGCTGACAAGTGTAACTCCGGAATGGAAACTTGTGAAGAAGCCCGTGAAAAAGCCGAAGCAGCTTTGATTACGCAAAAACGTCAGAGTGAATTGTGGCAGTCGAGAGCCCGGCAAAGAGGGTGGAAGGAAAACAGTTCTAAAGCGGTAAAGACCGCGTGA 564 47.7 MSLNRGRSCNPTVVKVGIILLGVCLVGYLVGPPLYWHVLEGLAAVRRSSAGVSCPTCNCDCDSQPLLSIPQALSNGSFTDCAKHDPEVNGETEKNFADLLSEELRLREAEALESQQHADMALLEAKKLTSQYQKEADKCNSGMETCEEAREKAEAALITQKRQSELWQSRARQRGWKENSSKAVKTA 187
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hetu46g00872 187 PANTHER EXPRESSED PROTEIN 8 182 - -
Hetu46g00872 187 Pfam Protein of unknown function (DUF1068) 12 179 IPR010471 -
Hetu46g00872 187 MobiDBLite consensus disorder prediction 163 187 - -
Hetu46g00872 187 Coils Coil 143 163 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hetu46g00872 - -
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Event-related genes

Select Gene_1 Gene_2 Event_name
313611 Hetu46g00872 Hetu48g00801
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Hetu Hetu-Chr10:7406929 Hetu46g00872 Hetu-Chr46:42784971 dispersed
Hetu Hetu-Chr11:5897112 Hetu46g00872 Hetu-Chr46:42784971 dispersed
Hetu Hetu-Chr11:11882242 Hetu46g00872 Hetu-Chr46:42784971 dispersed
Hetu Hetu-Chr12:6374863 Hetu46g00872 Hetu-Chr46:42784971 dispersed
Hetu Hetu-Chr30:46123796 Hetu46g00872 Hetu-Chr46:42784971 dispersed
Hetu Hetu-Chr46:42784971 Hetu48g00801 Hetu-Chr48:41189851 dispersed
Hetu Hetu-Chr46:42729014 Hetu46g00872 Hetu-Chr46:42784971 tandem