AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hetu46g00877 ATGGACTTCGACACACCGTCAGATCTCATCCACAAAGCTCAGATCGGCTTCAAACAAGCTGCCGGACTTTCATCTTTCAACCGTAACGACACAAATCTGCCGTCCATTTCTACCATCGAAGCCTCCATATCCTCCTTAGCCCCTTCCCCGCCCTACCTCAGATGCAAATTCTGTCAGGGTAAGCTTCTCAGAGGCTTACAGTCACTCATTTGCATTTACTGCGGTGAATACCAGAAGAAGGATCTAGATCCTGAACCTATATCGTTCAGTTCTACCCATGGTTATAGCTGGTTAATTCAGTCATTGAACTTCAACGGATCGGAAAGAGTCGGGTCATTAGCCGAAGGAGGTGGAGTAAACGGAGGACAGAATCCCGCAGAAGACGAATTAACTTTATCCGATCTTCTAGATTTAAAAATTTCATGGCGGGAGCCTGAGAAACCCGAAAGTAACATCAGTATCAAAACCTCTGAACATAACAGTTCTTCAAATCTTGATTCAACTGATTTTGACGACTTCTTTACAAAGTCAACGTCAAAGAGCGCAACTGCGCCAGATGTACTCAAACAACCAGTTGCTGTTGCCAGCAAAGCAGATCAAAATACGATCGTCGAGGATCAAGAAAGTCTTACTGATTGGAATGCAGAGTTTCAATTTGCGGATACCAAAATCGAAAGCGAGAAGCGCGAATCGGTTGACCTGTTTGCAGGTGCTGAAGCTGACGTGTCTGCGAACATAGATGCGGTTTTTGGACAGACGGAAAGCTTTGATTTTGAAAAACAGAATAACGCTTCCGACCTGTTTCAAGATGATCTTTTCGCCAACATGCCAGATGTTGATCTTGGACAGACAGAAAGCTTTGATTTCGAAAAACCGAATAATGCTTCGGACCCGTTTCAAGATGATCTTTTTGCCAACGTGAGTTCTAAAACGTTTCAGCAGAATGATCCGTTGGATTCAGTTCTTCAAGCGAAATATGATTTACCCGGTGATCGAAATGATTCTAGTTTAAAACGTGCGGATGACGATTGGTTTAGTGACGATAACTGGCAGAAAAGTAGCGTAAAAAGCTTAATAAACGATGTATCCGTACAGGTCAATCCAAATGTTTCATCAACAGATTGGTTTGAAAATACCAACAATACGGCTACCATTAAAGACGATAGTTTATTTGATATTAAACCACATGCAAATGACACGATTCCGTTCGAAAAGTCAGACGTTAATGACTGGTTTCAAGATAATCAGTGGGCGATCGGTGGTTCTAGTTCTACTACTACTAACGTTGTGGTCAGTAATGTTGATGACAATGACGGGTTTGGTGAATGGAATGATTTCACAAGCTCTACTGGTAATCAAGATTCTGTTCAAGATTCTTGGAAAGAAAGTGGTACTGAGAAAGTCGATTATGGTAGTAGTGAAAAGATGTCGGAATTGGATTTGTTTCAATCGGCGGTTGATTCACGGGATGTGGATTTCGGCAACTTTATGCAGTCGGATATGTTATCTGGTGATAAAAATACGACTGTTACTCAGACGGTGTATGATATCTTTTCGGAACTACCTACAGGAAACAGGATTGCTAATACTGAAGCTGCAAATAATGCCGAGGGATTAAAGAAGGACGAAATTACCTCTACTGCAACCACAAGTCCGAAAGATGATGTACAATTGCTGATGTCACAGATGCATGATTTGTCATTCATGCTAAAAAACGAGCTTTCAGTTCCATCAAAGCCCGATGATATTGGCACGTCTCACAGTTAA 1767 41.82 MDFDTPSDLIHKAQIGFKQAAGLSSFNRNDTNLPSISTIEASISSLAPSPPYLRCKFCQGKLLRGLQSLICIYCGEYQKKDLDPEPISFSSTHGYSWLIQSLNFNGSERVGSLAEGGGVNGGQNPAEDELTLSDLLDLKISWREPEKPESNISIKTSEHNSSSNLDSTDFDDFFTKSTSKSATAPDVLKQPVAVASKADQNTIVEDQESLTDWNAEFQFADTKIESEKRESVDLFAGAEADVSANIDAVFGQTESFDFEKQNNASDLFQDDLFANMPDVDLGQTESFDFEKPNNASDPFQDDLFANVSSKTFQQNDPLDSVLQAKYDLPGDRNDSSLKRADDDWFSDDNWQKSSVKSLINDVSVQVNPNVSSTDWFENTNNTATIKDDSLFDIKPHANDTIPFEKSDVNDWFQDNQWAIGGSSSTTTNVVVSNVDDNDGFGEWNDFTSSTGNQDSVQDSWKESGTEKVDYGSSEKMSELDLFQSAVDSRDVDFGNFMQSDMLSGDKNTTVTQTVYDIFSELPTGNRIANTEAANNAEGLKKDEITSTATTSPKDDVQLLMSQMHDLSFMLKNELSVPSKPDDIGTSHS 588
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hetu46g00877 588 PANTHER DENTIN SIALOPHOSPHOPROTEIN-RELATED 1 375 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hetu46g00877 - -
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Hetu Hetu-Chr46:43512051 Hetu47g00862 Hetu-Chr47:48118086 dispersed
Hetu Hetu-Chr46:42931488 Hetu46g00877 Hetu-Chr46:43512051 proximal