AGRP
Asteraceae Genomic Research Platform
Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Hetu46g00918 | ATGGCTTCTTCAACTTGCAGCTTCATCTTCTATGTTGTATTTCTTATACAATTTTGCAGCGCGCGTGAAATCGTGGACAAAAGCCAAAAAACCGATCACTACGAAGATGATCATATAAATATTTATGGGAAGAATGATATAAATGATTTGGATCCGGCTCTAAATGTGTTCTTTCATGTGAAAGATTTATATTTGCGCAAAAAAATGCCTATTTATTTCGCGGTTAATGATCCTTCAACAACTCCTAGGTTGTTAACAAGAGAACAATCGGATTCGATACCATTTTCCTCCAAAAGGCTCGCGTATCTGCTCGAGCTCATATCGTTAGCCGTGGGTTCACCACAGGCTCTAGCCATGGAACAAACACTTAAACAGTGTGAGCTTGAGGCGACCCCGGGTGAGACGAGGTTCTGTGCTAGCTCCTTAGAGTCCATGCTGGATTTGACACGTGGCATAATGGGTATGGACAAACTGAAGGCGTTGACCACAAATATTCATAATTTGTCAAATACCCTTTTGCAAGAATATACCTTTTTGAAGGAGCCAATGGAGATTAATGTTTCTGATATGGTGGCTTGTCACACCATGGCTTATCCTTATGTTGTTTATTATTGTCATGGTCAAAAGGGGTATAATAGGGTTTTTGAGATTTCTTTAGGGGGTGAAAATGGAAATTTTGTGGATGCAATTGCTGTCTGCCACATGGACACTTCCAATTGGGATAGCGATCACGTCGCGTTTCGGGTGCTCGGAGGCCAGCCTGGCAGCTCGCCGGTGTGCCATTTTCTCCCGGCCGATAATATCGTGTGGATACCGTCACCATAG | 825 | 42.91 | MASSTCSFIFYVVFLIQFCSAREIVDKSQKTDHYEDDHINIYGKNDINDLDPALNVFFHVKDLYLRKKMPIYFAVNDPSTTPRLLTREQSDSIPFSSKRLAYLLELISLAVGSPQALAMEQTLKQCELEATPGETRFCASSLESMLDLTRGIMGMDKLKALTTNIHNLSNTLLQEYTFLKEPMEINVSDMVACHTMAYPYVVYYCHGQKGYNRVFEISLGGENGNFVDAIAVCHMDTSNWDSDHVAFRVLGGQPGSSPVCHFLPADNIVWIPSP | 274 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Hetu46g00918 | 274 | PANTHER | BURP DOMAIN PROTEIN USPL1-LIKE | 35 | 273 | IPR044816 | - | |
| Hetu46g00918 | 274 | Pfam | BURP domain | 56 | 271 | IPR004873 | - | |
| Hetu46g00918 | 274 | ProSiteProfiles | BURP domain profile. | 57 | 273 | IPR004873 | - | |
| Hetu46g00918 | 274 | SMART | BURP-2 | 55 | 273 | IPR004873 | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Hetu46g00918 | - | - |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Hetu | Hetu-Chr46:45691595 | Hetu7g02017 | Hetu-Chr7:85882075 | dispersed | |
| Hetu | Hetu-Chr46:45691595 | Hetu46g00921 | Hetu-Chr46:45962803 | proximal | |
| Hetu | Hetu-Chr10:3747894 | Hetu46g00918 | Hetu-Chr46:45691595 | wgd | |
| Hetu | Hetu-Chr11:3122029 | Hetu46g00918 | Hetu-Chr46:45691595 | wgd | |
| Hetu | Hetu-Chr12:3337850 | Hetu46g00918 | Hetu-Chr46:45691595 | wgd | |
| Hetu | Hetu-Chr46:45691595 | Hetu47g00920 | Hetu-Chr47:50316504 | wgd | |
| Hetu | Hetu-Chr46:45691595 | Hetu48g00838 | Hetu-Chr48:43263132 | wgd | |
| Hetu | Hetu-Chr46:45691595 | Hetu8g01849 | Hetu-Chr8:85019224 | wgd |