AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hetu46g01100 ATGAAGAAGAATCAGACAAAGATAATGGAGATTCAGGAACAGGTTTTGCAAATCAAAGCTCCGAAGCCGAAGCGAAGGGTTAAAATAGTCTACATAGTCAGGGTACATGGTCTAAATGAAATTGTAACGGTTTCAAGAAATCAAATCGAATTTGGCTCGAGCAACTCTGAGATAGCTGAAGATATGGATATAGATTCGCATCAACAAAGTGTTCAAGATAAAGCGTTGGTAGTGTTGGATCAATCCGGAGACGGGTATGCAGATTCAGACGTTTTAGACGGACTCAGATTCTCACAATCCGTACTTGACTTCAAAGATATCCAGAATATCGATGATTTCAATATCGTTGTGGATGATTTAGTCATAGATTCTGAAATACCGAAGCATTTTCGAATCAAATACTATGAGTTATGTCATAGTCAAAAGTCATACCTTCATGAAAACCTCTTAAAAGGTTTTAATGTTAAACTAGCGGTTGGGATCATTCTTGAAACCGTTACAATTGCTGATGCAATAAAAGCTTGTAAAGTCGATATTGCTCGTGATGATCTTGTCACGTGGGATAAAACCCTTAAGGCATTTGAAGATCTTGGTATGAAAGTCGGGTTTTTAAGGGCCCGGTTATGTAAGCTTATCGGGCTTTTGTTTGAATCGAACGAGCTTTTGGAAGCAAAAAAGAATGAACGAGTGAAAGCAGAGGACGAGATGAGAAGGGTTAAAGAAGTGATCAAGAATCTTGATGTTGAGATTGAATCTTTGGAGCTAAAAGGCAAGAATCTTGAATTAGCCTTTTGTAAAGAGGCTGATGCACCTTGGTGA 819 38.34 MKKNQTKIMEIQEQVLQIKAPKPKRRVKIVYIVRVHGLNEIVTVSRNQIEFGSSNSEIAEDMDIDSHQQSVQDKALVVLDQSGDGYADSDVLDGLRFSQSVLDFKDIQNIDDFNIVVDDLVIDSEIPKHFRIKYYELCHSQKSYLHENLLKGFNVKLAVGIILETVTIADAIKACKVDIARDDLVTWDKTLKAFEDLGMKVGFLRARLCKLIGLLFESNELLEAKKNERVKAEDEMRRVKEVIKNLDVEIESLELKGKNLELAFCKEADAPW 272
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hetu46g01100 272 Coils Coil 215 263 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hetu46g01100 - -
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Event-related genes

Select Gene_1 Gene_2 Event_name
314408 Hetu46g01100 Hetu48g00977
406262 Hetu11g00056 Hetu46g01100
407297 Hetu12g00056 Hetu46g01100
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Hetu Hetu-Chr12:2744505 Hetu46g01100 Hetu-Chr46:56106495 dispersed
Hetu Hetu-Chr12:2779646 Hetu46g01100 Hetu-Chr46:56106495 dispersed
Hetu Hetu-Chr10:3217081 Hetu46g01100 Hetu-Chr46:56106495 wgd
Hetu Hetu-Chr11:2446921 Hetu46g01100 Hetu-Chr46:56106495 wgd
Hetu Hetu-Chr12:2728848 Hetu46g01100 Hetu-Chr46:56106495 wgd
Hetu Hetu-Chr46:56106495 Hetu47g01062 Hetu-Chr47:60508023 wgd
Hetu Hetu-Chr46:56106495 Hetu48g00977 Hetu-Chr48:53198696 wgd