AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hetu46g03350 ATGGAATTCTGGGTGGTTGCAGCAGCTACCGGTGCTGGTTATGTAGCCAAACACTGGCAGAACTTAACAGGTGAGAAAGACGGTTCATCGAAACCGTCACCTGTGCTATCACCGCGGGTGCAGCGGGACGCACGCCAACTGTTTGATAAAATTCCCAATTCAGTTTTCCCATTGCCGAAGCTACCAACAGGTTGCTTGTTAGATGGTGATGTTTCTTCTATTGCCGAAGAGGATAACACAGAAGAATTTAACAGACGATACGAGTGGTTTGACTTTGACTCTTCTAGGCATCATTTACATGAACGCAGAACCAAGAACTCAAATATAAAGTCTTTCTCGAGCCTAAGGCCGCTAGTGGTAACTAGTAATAGCAGAGATTATCAAAGAAAACAGATGATCGAAGTTGATGATGTGAAAGATCAGGCGATTGCGTTCATGGACGAAAAAGAAGCACCTACAAAAGCAGAGTTCTTTGAACCAACTGGATCGGTGAAGCTTCCAAGACGATCAGAACACATGCACGTCAAGAGATTTGAACCAAAAGATCTTCATTCACAAGGCGACGACATGGTTCCTTTGTTCCTCGGGGTTACAATCGGCATACTATCAACTATTGTGAGTAATCAGCGGGAAATTGAGCATCTAAATGAGCTACTGGAACAAGCTGAGAATATGGTTAAAGATTTACACAATAAACTTGAAATGAAAGATGGGTTTGATACCACAAATGACCATGCTACCGAGTCAGACGTGCCTGCGAACTATAGCCCAGAAGCCAAAAATTTTGAGTTAACAAGTGACATTGAAGCAGAGCTCGAGGCCGAGCTTGAGAGGTTAGAAGAAAATATGCAGAGATCATGTAGCGTACCGGAGAATTATTCAGACTTTGAGGCAGACATAGTTAGAGGAGACTTGAACCTAGATACGCTCACATGGCAACTCGATAGCCAATCGGAATCCGACCATGATGACAAATGGGTCAAAAGCGAAAGCACTGGGAAGCCTGATTTCACTCCGAATTACACTGTTTCACCCCTTGATTTGCGGTTACGGCTTCATGAAGTAATCGAGTTAGAACTCAGAGCTCGTATCGAGGAGCTTGAGGCAGTTCTTGAGGGAAAAAGTGGTCAAACTTATCCGGACTCTCCAGAACCGGAAGAAGATAACTCTTTCTGGGACTTTGACCACACAAGAATTGAATCTTCTTCTTCAACTCCTTAA 1221 43.82 MEFWVVAAATGAGYVAKHWQNLTGEKDGSSKPSPVLSPRVQRDARQLFDKIPNSVFPLPKLPTGCLLDGDVSSIAEEDNTEEFNRRYEWFDFDSSRHHLHERRTKNSNIKSFSSLRPLVVTSNSRDYQRKQMIEVDDVKDQAIAFMDEKEAPTKAEFFEPTGSVKLPRRSEHMHVKRFEPKDLHSQGDDMVPLFLGVTIGILSTIVSNQREIEHLNELLEQAENMVKDLHNKLEMKDGFDTTNDHATESDVPANYSPEAKNFELTSDIEAELEAELERLEENMQRSCSVPENYSDFEADIVRGDLNLDTLTWQLDSQSESDHDDKWVKSESTGKPDFTPNYTVSPLDLRLRLHEVIELELRARIEELEAVLEGKSGQTYPDSPEPEEDNSFWDFDHTRIESSSSTP 406
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hetu46g03350 406 Coils Coil 205 235 - -
Hetu46g03350 406 MobiDBLite consensus disorder prediction 317 331 - -
Hetu46g03350 406 PANTHER EMB|CAB62613.1 1 373 IPR040348 GO:0008356(InterPro)
Hetu46g03350 406 Coils Coil 262 289 - -
Hetu46g03350 406 MobiDBLite consensus disorder prediction 372 406 - -
Hetu46g03350 406 MobiDBLite consensus disorder prediction 316 340 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hetu46g03350 - -
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Event-related genes

Select Gene_1 Gene_2 Event_name
313852 Hetu46g03350 Hetu48g03026
314379 Hetu46g03350 Hetu48g03162
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Hetu Hetu-Chr46:25163423 Hetu46g03350 Hetu-Chr46:198332031 dispersed
Hetu Hetu-Chr46:198332031 Hetu48g00541 Hetu-Chr48:24048494 dispersed
Hetu Hetu-Chr46:198332031 Hetu48g03026 Hetu-Chr48:181545722 wgd
Hetu Hetu-Chr46:198332031 Hetu48g03162 Hetu-Chr48:187593120 wgd