Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Hetu47g01004 | ATGACAACAATGGTTGATATGGCCACCGTGTGCCACCAGTCGAGAGAAATGTCGGCATGTGGCGGCGATGGGTTTGCTTCCGGTGAAGCCACGTCATCCTCCGGCGATGATCATGATGCTTCTGATTTGGTTGCTTTGAAGATTTGTGTGTTGGGTGATGAACAAATTGGAAAAACAAGCTTCTTGGCAAAGTATGTTGGTAAAGAAAAAAATAAGGAAGAATTTGAAGCTAAAAGAATAAATCATATGGATAAAACACTACGGATTGGAGAAGCTAGAATTTCTTACAACATCTGGGAAGCTGGTGGAGACGCGTTATACCCAGACGGTGATTCAAAGAATATGATTCCTGCAGCTTGTAAGGACTCTGTAGCTATATTCTTCATGTTTGACTTAACAAGTCGTCGTACACTTTATAGTGTTATCAATTGGCATCAGCAAGCTAGGAACTACAACCAGACAGCAATGCTAGTGATGGTTGGAAGCAAGTTTGATGAATTTGTCCAGCTTCCCTTGGATTTACAATGGACTATCGCAAGCGAGGCGAGAGCATATGCGAAGGCCTTAAACGCGACATTGTTCTTCTCAAGCGCATCTTACAATATCAATGTTAATAAAATTTTCAAGTTTGTGACCGCAAAGCTATTTGACATTCCATGGACTCTCAAACGTAATCTTACACTTGGTGAACCTATTATCGATTTCTAG | 708 | 41.24 | MTTMVDMATVCHQSREMSACGGDGFASGEATSSSGDDHDASDLVALKICVLGDEQIGKTSFLAKYVGKEKNKEEFEAKRINHMDKTLRIGEARISYNIWEAGGDALYPDGDSKNMIPAACKDSVAIFFMFDLTSRRTLYSVINWHQQARNYNQTAMLVMVGSKFDEFVQLPLDLQWTIASEARAYAKALNATLFFSSASYNINVNKIFKFVTAKLFDIPWTLKRNLTLGEPIIDF | 235 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Hetu47g01004 | 235 | PANTHER | - | 44 | 234 | - | GO:0003924(PANTHER)|GO:0005525(PANTHER) | |
| Hetu47g01004 | 235 | ProSiteProfiles | small GTPase Rab1 family profile. | 39 | 235 | - | - | |
| Hetu47g01004 | 235 | Gene3D | - | 35 | 224 | IPR027417 | - | |
| Hetu47g01004 | 235 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 46 | 226 | IPR027417 | - | |
| Hetu47g01004 | 235 | PRINTS | Transforming protein P21 ras signature | 193 | 215 | - | - | |
| Hetu47g01004 | 235 | PRINTS | Transforming protein P21 ras signature | 46 | 67 | - | - | |
| Hetu47g01004 | 235 | PRINTS | Transforming protein P21 ras signature | 153 | 166 | - | - | |
| Hetu47g01004 | 235 | PRINTS | Transforming protein P21 ras signature | 87 | 109 | - | - | |
| Hetu47g01004 | 235 | Pfam | Ras family | 47 | 214 | IPR001806 | GO:0003924(InterPro)|GO:0005525(InterPro) | |
| Hetu47g01004 | 235 | SMART | rab-sub-5 | 46 | 218 | - | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Hetu47g01004 | - | - |
| Select | Gene_1 | Gene_2 | Event_name |
|---|---|---|---|
| 314880 | Hetu47g01004 | Hetu48g00907 | |
| 405280 | Hetu10g00136 | Hetu47g01004 | |
| 406290 | Hetu11g00121 | Hetu47g01004 |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Hetu | Hetu-Chr47:56795365 | Hetu16g00349 | Hetu-Chr16:13767268 | dispersed | |
| Hetu | Hetu-Chr10:5169675 | Hetu47g01004 | Hetu-Chr47:56795365 | wgd | |
| Hetu | Hetu-Chr11:4419626 | Hetu47g01004 | Hetu-Chr47:56795365 | wgd | |
| Hetu | Hetu-Chr12:4420159 | Hetu47g01004 | Hetu-Chr47:56795365 | wgd | |
| Hetu | Hetu-Chr46:52076324 | Hetu47g01004 | Hetu-Chr47:56795365 | wgd | |
| Hetu | Hetu-Chr47:56795365 | Hetu48g00907 | Hetu-Chr48:48464109 | wgd |