Gene detail

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Species

Gene ID

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Or, Query Sequence

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Gene details

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Hetu47g01011	ATGAGAAGAGAAACAAACGAGCTTCCGTCTATAAGCTATTCGCATCAAGCAAGTTCATACCACCAGGCCGCCATTGTCATCAACCTCGAGCTTATTCTGAACTCGCTAGGGTTACAAATGGAGAATAAACACAAGCTTAAAATCGCATTCACAGTCACTTGTCTTGCTGTGGCTTCAATTATACTCGCGAACAAGTTTCGAAAACATCGAAAGCGAAAACAGAACTCAACTTCTTGTTACTTGAAATCGGAAGCAAAACCGCAGCATAATTTCAAGCGTGTGCTAGCGAACAATTCGTACGCTCCGTTCAAGCACCTCAAGCTCGACGAAAATTCTTCGGATTTGCATCCGTATGAATCAGAGATCAAGGCTCTGTTGGAGAAATCACAGCTAGAATTTGAGTTTTCTAATGGAAGTATGGATATGAAGATGAGTGATAAGTATGTTTGGGTTGATGATGAATTGAAGTTAAAAGAACTTGTGGAAGTTTTAAGTGAAGAAAGAGTGTTTGCTGTGGATACTGAACAGCATAGCTTACGGTCATTCTTAGGGTTTACAGCTCTTATTCAGATTTCTACTAGAGATGAAGATTATTTGGTGGACACCATTGCTGTTCATGATATTATGGGACTTCTTGGCCCTGTATTTGCCAATCCCAATATCTGCAAGGTGTTCCATGGTGCTGATAATGATGTTATATGGCTACAAAGGGATTTTCATATATATGTTGTAAACTTATTCGACACTGCAAAGGCTTGTGATATTTTATCAAAACCACAGAGATCATTAGCCTACTTACTTGAAACATATTGTGGTGTCACCACTAACAAGCTTTACCAGCGTGAAGATTGGCGACAACGTCCGCTACCAATAGATATGGTTGAGTATGCTCGGATGGATGCACACTATTTGCTTTATATTGCAGACTGTCTCGTTTCTGAGCTAAAAAACCAGAAAAACGAAGAGAATAAACTAATAAATTCTAAAGATAATAGTGCATCAGAAAATTCAGCCACTCTCGATGACGATTTGCATTTTGTTTCTGAGGCCATCCGGCGTTCGAATGCCTTGTGTCTGCAACTCTTCACCAAAGATCTAGAAGCTTCCCCAGGGCAATCTGCTGCTGCTTCTATGATTTCTCGCCACTTAAATGATCATGGGAGTTCTGCAAACAACAGCCAGTTTCAGGATCTTGTTAGACGTCTATGCTGTTGGAGGGATTTGATGGCCCGTATGCATGATGAGAGCCTTAAATACGTACTATCTGATAATGCTATTGTATCTCTAGCTGAAACAGTTCCACTATCTCCAACTGATATCTGCACCACAATATCACAAACTGATATAGACACAGACTTTCTAAATTCCAATTCTACCCCTCGGTTTCCATCCTCTGTTGTCTCGAGTCATTTGGATGACTTCCCATACCTCCTCCAAAACGAGACAAACAATCTTGACGATTTATTTCAACTAATTCTCAAAAAGCACCTTGGTCCAAATGGTTCTTGTCCTTTTTCACTTTACAACTATGGTTTACTTTCTAAAACCAACATTAAATCTTCAAAGAGATTAGTTACAAAGGCGAGTGGATACAAGTTATCAAAACAAGTTGCTCGCAAGGCTTCTCGAGAGCTGTTTGTTCAGAAGTTCTCTTGCAAATCTCCGGTGTATCATAACTGCAGGATATATGCTAATGATGGAAGATTGTTGTGTTACTGCGATCGAAGGAAGCTAGAATGGTATGTGCAGCGGGATCTAGCGAAAATTGTTGACGAAGACCCACCAGCCATAATGCTTCTTTTTGAACCCAAAGGTCGTCCAGAAGATGAAGGAAATGATTTTTATATTCAAAGTAAAAAAAATATATGTGTAGGGTGTGGTGAAGGAAATCACTATTTACGGTACCGTATAATCCCATCATGCTATAGAATCCACTTTCCCGAACATTTAAAAAGCCACCGGTCTCATGATATTGTTTTAGTTTGTGTCGATTGCCATGAAAAAGCACATTCATCTGCCGAAAGGTACAAAAAGAAAGTAGCTTTAGAATTCGGGATACCGTTATTTGTACATAAAGTGGTTAATTCTAACGAGCAACAAGATGTTTCCGGATCTTCGACATCTGTCATGAAACTTGGTGATTGCGGTGTGTCTCCTTTAGAGTTGAGAACTGCTGCAATGGCTCTTATTAGGCATGGCCCACGCATGCCACCTCAGCGCCGTGAGGAGTTGAAACAGGTTGTCAAGAAATACTATGGAGGAAGAGAAATATCAGAGGAAGATTTAGAAAAGGCTTTACTAGTAGGAATGAGTCCTCACGAAAAAAGACGATTACGGAAAAAAAGGGGCATATCTCTTAACAACACTTCTTCAAACAACATTGTTTCAGACAACGACATCAAGGGAGAAGATAATGTGGATTCATACAAAAATGAAGTTCACGAGCCCGAAAACGGTTCAAATCTGGATATTACGGATCCATCTGAAGTTGAACCAAACGGGCAGGTTCATTCGAGTTCTGATGGGGCGGTGTTTGCCACATGTAGTTCAAAGTTATCATTATTAGGACATGGCCCACATGGGAAACAAGTTGTTGATTATTTACTGAAGAACCATGGGGAAGTTGGGATTCAAGAATTTTGTCAAAGATGGAGACAAGTTTTTGTTGAAAGTATTAATCCTCGTTTTTTGCCTGCGGGGTGGGATGTGACTCACAGCGGTAGACGAGAGTTTGGGGACTTCAGTGTATACAATCCTGCAAATAAGGCTCCTGTTGCTACTAAGGATTAG	2790	40.32	MRRETNELPSISYSHQASSYHQAAIVINLELILNSLGLQMENKHKLKIAFTVTCLAVASIILANKFRKHRKRKQNSTSCYLKSEAKPQHNFKRVLANNSYAPFKHLKLDENSSDLHPYESEIKALLEKSQLEFEFSNGSMDMKMSDKYVWVDDELKLKELVEVLSEERVFAVDTEQHSLRSFLGFTALIQISTRDEDYLVDTIAVHDIMGLLGPVFANPNICKVFHGADNDVIWLQRDFHIYVVNLFDTAKACDILSKPQRSLAYLLETYCGVTTNKLYQREDWRQRPLPIDMVEYARMDAHYLLYIADCLVSELKNQKNEENKLINSKDNSASENSATLDDDLHFVSEAIRRSNALCLQLFTKDLEASPGQSAAASMISRHLNDHGSSANNSQFQDLVRRLCCWRDLMARMHDESLKYVLSDNAIVSLAETVPLSPTDICTTISQTDIDTDFLNSNSTPRFPSSVVSSHLDDFPYLLQNETNNLDDLFQLILKKHLGPNGSCPFSLYNYGLLSKTNIKSSKRLVTKASGYKLSKQVARKASRELFVQKFSCKSPVYHNCRIYANDGRLLCYCDRRKLEWYVQRDLAKIVDEDPPAIMLLFEPKGRPEDEGNDFYIQSKKNICVGCGEGNHYLRYRIIPSCYRIHFPEHLKSHRSHDIVLVCVDCHEKAHSSAERYKKKVALEFGIPLFVHKVVNSNEQQDVSGSSTSVMKLGDCGVSPLELRTAAMALIRHGPRMPPQRREELKQVVKKYYGGREISEEDLEKALLVGMSPHEKRRLRKKRGISLNNTSSNNIVSDNDIKGEDNVDSYKNEVHEPENGSNLDITDPSEVEPNGQVHSSSDGAVFATCSSKLSLLGHGPHGKQVVDYLLKNHGEVGIQEFCQRWRQVFVESINPRFLPAGWDVTHSGRREFGDFSVYNPANKAPVATKD	929

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Hetu47g01011	929	Pfam	HRDC domain	396	439	IPR002121	GO:0003676(InterPro)
	Hetu47g01011	929	MobiDBLite	consensus disorder prediction	787	838	-	-
	Hetu47g01011	929	Pfam	3'-5' exonuclease	148	315	IPR002562	GO:0003676(InterPro)\|GO:0006139(InterPro)\|GO:0008408(InterPro)
	Hetu47g01011	929	Gene3D	-	62	368	IPR036397	GO:0003676(InterPro)
	Hetu47g01011	929	FunFam	Polynucleotidyl transferase ribonuclease H fold protein with HRDC domain	85	368	-	-
	Hetu47g01011	929	SUPERFAMILY	Ribonuclease H-like	86	319	IPR012337	-
	Hetu47g01011	929	SUPERFAMILY	HRDC-like	392	445	IPR010997	GO:0000166(InterPro)\|GO:0044237(InterPro)
	Hetu47g01011	929	SMART	35exoneu6	148	316	IPR002562	GO:0003676(InterPro)\|GO:0006139(InterPro)\|GO:0008408(InterPro)
	Hetu47g01011	929	PANTHER	POLYMYOSITIS-SCLERODERMA AUTOANTIGEN-RELATED	69	922	IPR045092	GO:0000175(InterPro)\|GO:0000175(PANTHER)\|GO:0000176(PANTHER)\|GO:0000467(InterPro)\|GO:0000467(PANTHER)\|GO:0003727(PANTHER)\|GO:0005730(PANTHER)\|GO:0071035(PANTHER)\|GO:0071036(PANTHER)\|GO:0071037(PANTHER)\|GO:0071038(PANTHER)\|GO:0071039(PANTHER)\|GO:0071040(PANTHER)\|GO:0071044(PANTHER)\|GO:0071051(PANTHER)
	Hetu47g01011	929	CDD	Rrp6p-like-exo	144	331	IPR049559	-
	Hetu47g01011	929	Gene3D	HRDC domain	383	489	IPR044876	-
	Hetu47g01011	929	ProSiteProfiles	HRDC domain profile.	392	477	IPR002121	GO:0003676(InterPro)
	Hetu47g01011	929	MobiDBLite	consensus disorder prediction	821	838	-	-
	Hetu47g01011	929	MobiDBLite	consensus disorder prediction	800	819	-	-

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Hetu47g01011	K12951	cobalt/nickel-transporting P-type ATPase D [EC:7.2.2.-]

Event-related genes

Select	Gene_1	Gene_2	Event_name
	314881	Hetu47g01011	Hetu48g00914

Duplication type information

Select	Gene1	Location1	Gene2	Location2	Duplicated-type
	Hetu	Hetu-Chr46:52426038	Hetu47g01011	Hetu-Chr47:56975260	wgd
	Hetu	Hetu-Chr47:56975260	Hetu48g00914	Hetu-Chr48:49039090	wgd