AGRP
Asteraceae Genomic Research Platform
Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Hetu47g01061 | ATGTTGAGCAGCAGCAGCAGCAGCAGCAGCGGCTCTGGGGGAACCGTTTACTGGTTCCGAAACGAACAACCCACTTCGAATTTCAAAGGAATTGTTGTGATTTTCACTTGGGGTTCTGTTCAATTGAAGGATTATGTCAATCTTTATTCGTCTTGTGGCTGGGATTCTCTCGTTGTTGTTTCCGATTTTCTCAATCCATTTTTTCCAGAGAGAGCCACATCGCTTGCATTTTCCGTTCTCAATGAGCTTTTAGAGGAATTGAGGGCTAGACCATGTCCGTTAGTTTTTGCAGCCTTTTCGGGTGGTTCACAAGCCTGTATGTATAAGGTTCTTCAGATCATTGAAAGGACATGTGAAGCACATCTTAATCTGGATGATAGTCGTTTGATCATGACCTGCATCTCTGGTCAAATGTATGACTCGGGTCCGGTCAATGTAACAAGTGATTTGGGTGCGCGGTTTGCTCTACAATCTTCAATTCTCAACGTACCCGGTTCGTCAAAGTTGGCATCAATGGTTGCAAAAGGTGTTACTTCTGGTCTTGATGCTCTTTTCCTTACAAGATTTGGATCCCACCGCTCTGAATATTGGCAAACGTTGTACTCGTCTGTTGGTTTGGGTGCCCCATTTCTCATATTGTGTTCGGAAAACGACGACCTTGCCCCATATCCAGTTATTTGCTCATTTGCTCAACAAGTACAGGGATTAGGAGGACATGTTCGACTAATTGGATGGAAGGACTCTCCTCACGTAGGTCACTACAAGCACAACCCCATCCAATACAGAGCAGCGGTAACCGAATTTCTCGACCACTCAGTTTCAATATTCAACCAAAAACTTCAAAAACTCGGTGAAAGAAACGGCATGGAGGGCATGCACGATAAGATATGTGAATTAATTTGCGACCTCCAAAAAGCCGCAGTTGATTCAAACCAAAGCCTTAGAAGAGTAGCGACGGGGCCAAACGATCACTTCTTCTTACCAAGTTCAGCCGAGTATCAAACCACTAAAGAATCTGGTTCATTACAAGATGAACAAAGAACAACAGTCCATTTATCAAGCCCACCGGGCCTGAACCCACACAGTGTTCTTGGTCAAGTGCTGTTTGATGTGTGTGTTCCTAAAAACATCGAAGGTTGGGATATTAAGTTTGAAAATAGAAAGGCGTTTGCAACCGCAGGTAAACAGTCATCATATTTAAAACGCATGAGACGATCAAGATTATGA | 1227 | 43.68 | MLSSSSSSSSGSGGTVYWFRNEQPTSNFKGIVVIFTWGSVQLKDYVNLYSSCGWDSLVVVSDFLNPFFPERATSLAFSVLNELLEELRARPCPLVFAAFSGGSQACMYKVLQIIERTCEAHLNLDDSRLIMTCISGQMYDSGPVNVTSDLGARFALQSSILNVPGSSKLASMVAKGVTSGLDALFLTRFGSHRSEYWQTLYSSVGLGAPFLILCSENDDLAPYPVICSFAQQVQGLGGHVRLIGWKDSPHVGHYKHNPIQYRAAVTEFLDHSVSIFNQKLQKLGERNGMEGMHDKICELICDLQKAAVDSNQSLRRVATGPNDHFFLPSSAEYQTTKESGSLQDEQRTTVHLSSPPGLNPHSVLGQVLFDVCVPKNIEGWDIKFENRKAFATAGKQSSYLKRMRRSRL | 408 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Hetu47g01061 | 408 | PANTHER | UNCHARACTERIZED | 6 | 277 | IPR008547 | - | |
| Hetu47g01061 | 408 | MobiDBLite | consensus disorder prediction | 337 | 356 | - | - | |
| Hetu47g01061 | 408 | SUPERFAMILY | alpha-beta-Hydrolases | 73 | 269 | IPR029058 | - | |
| Hetu47g01061 | 408 | Gene3D | alpha-beta hydrolase | 146 | 283 | IPR029058 | - | |
| Hetu47g01061 | 408 | Pfam | Eukaryotic protein of unknown function (DUF829) | 134 | 380 | IPR008547 | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Hetu47g01061 | - | - |
| Select | Gene_1 | Gene_2 | Event_name |
|---|---|---|---|
| 406265 | Hetu11g00059 | Hetu47g01061 | |
| 407300 | Hetu12g00058 | Hetu47g01061 |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Hetu | Hetu-Chr13:129379860 | Hetu47g01061 | Hetu-Chr47:60502899 | dispersed | |
| Hetu | Hetu-Chr47:60502899 | Hetu6g02364 | Hetu-Chr6:157057128 | dispersed | |
| Hetu | Hetu-Chr10:3230133 | Hetu47g01061 | Hetu-Chr47:60502899 | wgd | |
| Hetu | Hetu-Chr11:2510186 | Hetu47g01061 | Hetu-Chr47:60502899 | wgd | |
| Hetu | Hetu-Chr12:2795276 | Hetu47g01061 | Hetu-Chr47:60502899 | wgd | |
| Hetu | Hetu-Chr46:56101335 | Hetu47g01061 | Hetu-Chr47:60502899 | wgd | |
| Hetu | Hetu-Chr47:60502899 | Hetu48g00978 | Hetu-Chr48:53201657 | wgd |