AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hetu48g00774 ATGCCCCCGGGTTACATGATGAGATGCGACAGTAATCGACACTTTTATCCGTTAACAAGCTTCCAGATAGGGTACGAACCTTTTGCTTTATCAGACGCACTTGATTTATCATTGGATTTGCAGTCTTATCTTTCGGATCTTAGCCTTTTCTTGGCCCCTGATAGCAAAGAGTTCTACGTATTAGTGGATAACAGGCCATGGTTGGAAGCTCTGCCCTCACGGCCCGCACACTTATGGCAGTTAATGGTTACCAAGTCAAGGATGTCCCCTTTTGCAAACACACGGGGGCGAGGGCGAAAAGGGAAAAAAGATACGACAGTGTTTATCGAACAGGAAGCCGGATCTAAATCATCAAACCACTCGAAAAACTTGAAAAAATGGTTCTCAGTGGTTAATGCCGCAACACTATCAAAAAAGAGGGCTTTGTTACCTGTTAAAAAGCTCAGGAATTCCTTGCTTGCCAATAGCAAGTTGCATAGAACTTTGTTCGGGTTTATCGTGTTTCAAGTGTCGTGGAAAGATGTTCGTGGTATCAATTACGTAAATGAGCTTCAGACCGACACATCTCTTGCTATAGAGGCTAAATACATGAAAAGATGGGAATTTGATAGCATAAATCAAGCGGTTAAATGCATAAATACATGGTTTCCGGGGACACCGCATGAACAAGATCTATTGGAAGAGCATCTCAACTCCATGCTAGGAGAAGAATTCCATGATGCATCCAGTGAATTTCCAGACAGCCACAGTACAAACGGTAATGAAAAAATCTCAAATGCTAGTGCGAGTGGGCCCGACGGATCTCCCCGCACACCGCGGTGCAATCTTAGTGAAAAAATAGAAATAGAAACTTCATTCAATCAAACAAGTATACCACATACGCCCCCTCCCGATGGACCCTATAAAAGACGGAAACTAATGTCTCCTATAGGAATTAACATGAATTCAAGTTTTTATACCGAAATTACCAATGGCGAAAGCATTTGCACACCAATGGCCTCATCTTACTCAAATGATTGCGAAGATACAACTGAACCTATGGAGTACAAGGATGCGTTACTTATGTTTCGGTTCAACGATCATGACCTCCCGTTTGAATTACAAAAAATCATATTATCTGATATACGATTGCTCACTCTATTAGAAGCGGGACTTCCATCCTGGGTAATTTTCTGTCAATCCTATCCCGTATTTTGTCATATCTACCGCCCATGGATGTGCCCTTTAGCTCGGGCTCTATACGTAGCAATTTCCATTGTTACGGTCGTTATCGGTTTCTACGATTTGTACAAAAACGTTCCAGTGCTAAAAGCTACCGCCTCCCGTTTATGTGGGCCCCTTTTCGATTGGATAGAAACATGGGAGATGGTGTCGAGAATTAAGTATTTGGGTACTATGTTGTTTCTGCATAACTCTGAGAAGGCAGTTATGTGGTTCTTGATGATGACACGTACCGTTCGGTCTTTTGTTTCGATTGTCACACAACCGTTAAAGGGCCCGTTTTCGGATTTTATTGAGGTTATATTTCCGGTTTGGACGTTGTTAATCCAAACGGGCCAATATTTATTCTCGTTTGTTTGGGTTTTGATGGAAAGTTCATGGGTCGTGTTGGAGGATCTAATTGAAGTCGTATTAATGCCTGTGTGGTTCGTCTGTTCGGTTATTTGGATTATTGTTTCGACTGTTATGTACCCAATATTTTGGTGCATTTGGGGAATGCTCTATGCTCCAGTTAGTCTCATTCTCGGTCTATCCAATTTTGTGGGATATGTTTATAACGAAACATATGATTTAGCTCGAGACATATGGCTTGTTGCAAGTGGGTTCTTCAAGTTGGCTTCAAACGCCGAGTCAGCAGTCAACACGTATGAGGTTTCTATTTGGCGGTCTCTCTGGAATGATCTATTTTCTCAGGTTTTTCGTGCTGTTCGGAGTATTTTAAACGGATTTGTGGCATTTTTTACAGCTTGCAACAGACATCGATTAAGCATATATAATCATTCACAGGAGCTCATTAGAACGATTAATCATCCAGCCCAGAGGCCAATGCCCTCGAATTCTAGCCACCGATCACAGGGAACTGGAAATCAAACGCGGGGAGAGGCTGAAGAAAGAAAGGTGACGCCACCTAGGAGAAACTTAAAACAGAGTTGA 2154 42.29 MPPGYMMRCDSNRHFYPLTSFQIGYEPFALSDALDLSLDLQSYLSDLSLFLAPDSKEFYVLVDNRPWLEALPSRPAHLWQLMVTKSRMSPFANTRGRGRKGKKDTTVFIEQEAGSKSSNHSKNLKKWFSVVNAATLSKKRALLPVKKLRNSLLANSKLHRTLFGFIVFQVSWKDVRGINYVNELQTDTSLAIEAKYMKRWEFDSINQAVKCINTWFPGTPHEQDLLEEHLNSMLGEEFHDASSEFPDSHSTNGNEKISNASASGPDGSPRTPRCNLSEKIEIETSFNQTSIPHTPPPDGPYKRRKLMSPIGINMNSSFYTEITNGESICTPMASSYSNDCEDTTEPMEYKDALLMFRFNDHDLPFELQKIILSDIRLLTLLEAGLPSWVIFCQSYPVFCHIYRPWMCPLARALYVAISIVTVVIGFYDLYKNVPVLKATASRLCGPLFDWIETWEMVSRIKYLGTMLFLHNSEKAVMWFLMMTRTVRSFVSIVTQPLKGPFSDFIEVIFPVWTLLIQTGQYLFSFVWVLMESSWVVLEDLIEVVLMPVWFVCSVIWIIVSTVMYPIFWCIWGMLYAPVSLILGLSNFVGYVYNETYDLARDIWLVASGFFKLASNAESAVNTYEVSIWRSLWNDLFSQVFRAVRSILNGFVAFFTACNRHRLSIYNHSQELIRTINHPAQRPMPSNSSHRSQGTGNQTRGEAEERKVTPPRRNLKQS 717
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hetu48g00774 717 PANTHER OS05G0597400 PROTEIN 7 712 - -
Hetu48g00774 717 MobiDBLite consensus disorder prediction 678 698 - -
Hetu48g00774 717 MobiDBLite consensus disorder prediction 240 274 - -
Hetu48g00774 717 MobiDBLite consensus disorder prediction 245 270 - -
Hetu48g00774 717 MobiDBLite consensus disorder prediction 678 717 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hetu48g00774 - -
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Event-related genes

Select Gene_1 Gene_2 Event_name
313605 Hetu46g00840 Hetu48g00774
314828 Hetu47g00837 Hetu48g00774
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Hetu Hetu-Chr46:40363969 Hetu48g00774 Hetu-Chr48:39191239 wgd
Hetu Hetu-Chr47:45444347 Hetu48g00774 Hetu-Chr48:39191239 wgd