AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

leaf

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hetu48g00798 ATGGAGGAGGTGATCACCATCGCCCACGCGGCGTACCACGCTACCACGGCGGCAGTGACACCGTCGTCTTCAGCTCCGGTGCTTCCGTACAGTGTACCGCTGTTGTCAGCGTTCCTTGCGTTTGCGATTGCTCAATTCCTCAAGGTTATTACTACCTGGTATAAGGAAAAGAAATGGGATCCTAAAAAGATTGTGGGCTCAGGTGGAATGCCTTCATCTCATTCTTCAACTGTTGTGGCACTTGCAGTATCCATTGGTCTACATGATGGCGTTGAATCATCATCATTTGCAATTGCTGTTGTTATGGCTTTTATCGTTATGTATGATGCATCTGGAGTCAGACTCCATGCCGGTCGCCAGGCTGAAGTGTTAAACCAGATCGTCTGTGAATTTCCTCCGGAGCACCCGTTATCTACATCCAGACCTCTACGTGATTCTCTTGGGCATACTCCATTACAGGTGATTGCAGGGGCCATGTTAGGATTTATAGTGGCACTTATGATGAAAGCATCTGAGTAG 519 48.17 MEEVITIAHAAYHATTAAVTPSSSAPVLPYSVPLLSAFLAFAIAQFLKVITTWYKEKKWDPKKIVGSGGMPSSHSSTVVALAVSIGLHDGVESSSFAIAVVMAFIVMYDASGVRLHAGRQAEVLNQIVCEFPPEHPLSTSRPLRDSLGHTPLQVIAGAMLGFIVALMMKASE 172
leaf

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hetu48g00798 172 CDD PAP2-like 34 166 - -
Hetu48g00798 172 PANTHER ACID PHOSPHATASE-VANADIUM-DEPENDENT HALOPEROXIDASE-RELATED PROTEIN 14 170 IPR003832 -
Hetu48g00798 172 Pfam Divergent PAP2 family 33 164 IPR003832 -
leaf

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hetu48g00798 K09775 uncharacterized protein
leaf

Event-related genes

Select Gene_1 Gene_2 Event_name
313610 Hetu46g00867 Hetu48g00798
314832 Hetu47g00856 Hetu48g00798
leaf

Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Hetu Hetu-Chr48:41070885 Hetu50g03675 Hetu-Chr50:212059622 dispersed
Hetu Hetu-Chr4:172851529 Hetu48g00798 Hetu-Chr48:41070885 transposed
Hetu Hetu-Chr46:42574523 Hetu48g00798 Hetu-Chr48:41070885 wgd
Hetu Hetu-Chr47:47709086 Hetu48g00798 Hetu-Chr48:41070885 wgd