Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Hetu48g00850 | ATGATACGAGCGGTTATTGTAATTAACGATCAAGGCAAGCCTCGCCTTGTCAAATTCTACGACTATCAGCCGGTGGAGAAACAACAGGAAATTATTCGGAACATATACGGAGGTCTGTTTCAGTTTCCGTTACGATTATTTGCTTATAATCGTTTCATTCTATGCAGTCGAGCTGAGAATGTGAGCAACTTTGTTCAGGATTCAACTTTTGGACCGGATACCCGACTTGTATACAAGACCTTTGCTACACTATACTTCATTGTCATATTTGATGAGTCTGAAAATGAACTTGCTATACTAGATCTTATGCAAGTATTTGTGGAGACGTTGGACAAGTGTTTCAGTAATGTGTGTGAGCTCGATATTGTTTTCAATTTCAACAAGGTACATACCATACTTGATGAGATTATTTTGGGTGGTCAAGTTGTGGAAATGAGTTCTTCTGAGGTTGTCAAATCAACCGACGACATTTCTTGGCTGGAGAAGAACCCGAATTCTATCACGAGAGTTTCAAAATCCATATCCGGTTGGCAGGGACGATAA | 543 | 39.78 | MIRAVIVINDQGKPRLVKFYDYQPVEKQQEIIRNIYGGLFQFPLRLFAYNRFILCSRAENVSNFVQDSTFGPDTRLVYKTFATLYFIVIFDESENELAILDLMQVFVETLDKCFSNVCELDIVFNFNKVHTILDEIILGGQVVEMSSSEVVKSTDDISWLEKNPNSITRVSKSISGWQGR | 180 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Hetu48g00850 | 180 | PANTHER | ADAPTOR COMPLEXES SMALL SUBUNIT FAMILY | 2 | 158 | IPR016635 | GO:0015031(InterPro)|GO:0016192(PANTHER)|GO:0043231(PANTHER) | |
| Hetu48g00850 | 180 | PIRSF | AP-complex-sigma | 1 | 171 | IPR016635 | GO:0015031(InterPro) | |
| Hetu48g00850 | 180 | Gene3D | - | 1 | 172 | - | - | |
| Hetu48g00850 | 180 | Pfam | Clathrin adaptor complex small chain | 1 | 155 | IPR022775 | - | |
| Hetu48g00850 | 180 | ProSitePatterns | Clathrin adaptor complexes small chain signature. | 76 | 86 | IPR000804 | GO:0006886(InterPro)|GO:0016192(InterPro)|GO:0030117(InterPro) | |
| Hetu48g00850 | 180 | SUPERFAMILY | SNARE-like | 1 | 153 | IPR011012 | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Hetu48g00850 | K12399 | AP-3 complex subunit sigma |
| Select | Gene_1 | Gene_2 | Event_name |
|---|---|---|---|
| 313635 | Hetu46g00944 | Hetu48g00850 | |
| 314858 | Hetu47g00935 | Hetu48g00850 |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Hetu | Hetu-Chr48:43956685 | Hetu9g01505 | Hetu-Chr9:61411891 | dispersed | |
| Hetu | Hetu-Chr46:46661122 | Hetu48g00850 | Hetu-Chr48:43956685 | wgd | |
| Hetu | Hetu-Chr47:51459353 | Hetu48g00850 | Hetu-Chr48:43956685 | wgd |