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AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hetu48g00904 ATGGCGATCAAATCGGTGATTACAGCCTCATCGTTGACCGGAGAAGCCTTTGAATCAGTCGACGTTCACTTCTCCGACTCTGATTCCGATTCGTGGCAGGTTATCGATGCCTCTGATTCCGACGACGGATACTTCAGTTACGGTGACGTCACCACCACTGACGATGAAGACGACGACGTCGTTCCGGATGTTGATGATCTTCTTCAACATCCGTTTGGATCTCCGTTGTCTGATGTTTCTATGCAGTCTGCTGTGGAAGAAATTGCTCATCGGTTGCAGGAAGTTAAACACGCATATGAAATCGATCACATCCATCAGATAATCGACGATGGTGGTTTGGGCGAGGGTGAAGATGATCCGCACAGAGAGGATGAAGATGAGAGTGATCAAGATGAAGATGATGAGGATTTGGACGATGAACTGGTGCCGAAATGGTTGAATAACAAATTCGAACGACAGAGGATGAGAAAATTGGGGAAAAGAGCGTATCCGAAGATGAAAAAATCTAAACGGCTGGCTTACATGTACAACAAACCTGGATGTGTTCATGGAAAGCATGGCTTAGGAATGAAGCACAATCTGATGATCTAA 591 45.69 MAIKSVITASSLTGEAFESVDVHFSDSDSDSWQVIDASDSDDGYFSYGDVTTTDDEDDDVVPDVDDLLQHPFGSPLSDVSMQSAVEEIAHRLQEVKHAYEIDHIHQIIDDGGLGEGEDDPHREDEDESDQDEDDEDLDDELVPKWLNNKFERQRMRKLGKRAYPKMKKSKRLAYMYNKPGCVHGKHGLGMKHNLMI 196
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hetu48g00904 196 PANTHER VID27-LIKE PROTEIN 1 193 - -
Hetu48g00904 196 MobiDBLite consensus disorder prediction 109 144 - -
Hetu48g00904 196 MobiDBLite consensus disorder prediction 119 140 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hetu48g00904 - -
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Event-related genes

Select Gene_1 Gene_2 Event_name
313656 Hetu46g01024 Hetu48g00904
405278 Hetu10g00132 Hetu48g00904
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Hetu Hetu-Chr29:165105723 Hetu48g00904 Hetu-Chr48:48119075 dispersed
Hetu Hetu-Chr10:4889236 Hetu48g00904 Hetu-Chr48:48119075 wgd
Hetu Hetu-Chr11:4247275 Hetu48g00904 Hetu-Chr48:48119075 wgd
Hetu Hetu-Chr12:4303531 Hetu48g00904 Hetu-Chr48:48119075 wgd
Hetu Hetu-Chr46:51649835 Hetu48g00904 Hetu-Chr48:48119075 wgd
Hetu Hetu-Chr47:56383066 Hetu48g00904 Hetu-Chr48:48119075 wgd