Gene detail

Gene Search

Species

Gene ID

Example:

Or, Query Sequence

Example:

Gene details

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Hetu48g00972	ATGTCAGCTTTCCACGTCAAATTCCTTACACCCAACTCATTTCTCAACCCGGTTACCGGTATAATAAGTTCCACTAGGCTCTATGCAAACCCGTCCCAAACCACGGTCCCAGCAGCGCCTGCTGCTCAGGCGCCAAAGGAGATCGCGGCGGAACGACTAGAACCGAGAGTTGAAAAGAGAGATGGGTATTATATACTCAAGGAAAAGTTTAGGGATGGTATTAATCCACAAGAGAAGGTTAAGGTTAATGGTGAACCAATGAAACTGTTCATGGAAAATGGGATTGAAGAGCTTGCAAAGATCCCATTTGAAGAGCTTGATAAGTCTAAGGATAGTAAAGATGATGTTGATGTTAGACTTAAATGGCTTGGTTTGTTTCATAGAAGGAAACATCAATATGGTCGGTTTATGATGAGGTTGAAGCTTCCAAATGGCGTAACAACTAGTGCACAAACCCGATACTTAGCTAGTGTGATAAAACAATATGGTGAGCATGGTTGTGCTGATATTACCACACGCCAAAACTGGCAAATTCGAGGTGTTACACTACCCGATGCACCCGCAATTATAAAGGGTCTCAAGGAAGTTGGTTTAACAAGCATCCAAAGCGGTATGGACAATGTTAGAAACGCGGTTGGAAACCCGCTTGCTGGAATCGATCCACATGAAATTGTGGACACGAGGCCATATCTTGACGTGTTACAACAATTCATCACTGCAAATTCACAAGGGAATCCCGAATTTACCAACTTGCCAAGGAAGTGGAATGTGTGTGTGATTGGTTCACACGATCTTTATGAGCACCCGCATATCAACGATCTAGCATACATGCCAGCCACGAAGAATGGTCAATTCGGGTTCAATTTGTTGGTAGGGGGATTCTTTAGCGCTAAGCGGTGCGCCGAGGCTATACCTCTTGACGCGTGGGTCCCAGAAGAAGACGTAGTCCCAGTTTGTGGAGCGATTCTCGAGGCTTTTCGTGATCTTGGTTTTAGAGGGAATAGGCAAAAGTGTAGAATGATGTGGTTGATTGATGAACTTGGTGTAGAAGGGTTTCGGTCAGAAGTGGTAAAGAGAATGCCACAACAAGCATTGGAAAGAGCATCTTCTGAAGACCTCATTGACCACAAATGGGAAAGAAGGGATTACTTTGGTGTGCACCCACAAAAACAAGAAGGCTTGAGCTTTGTGGGCATTCACATTCCCGTGGGCCGGCTCGAAGCCGATGACATGGACCAATTGGCACGATTAGCTGATGCGTACGGCTCAGGAGAGCTTCGGTTAACCGTGGAACAAAACATCATAATCCCAAACATAGAAAACTCAAAAGTTGAGGCGTTGCTTAACGAGCCACTTTTAAAAGAAAAGTTTTTACCCGAGCCACCTATTTTGATGAAAGGTTTAGTGGCATGTACGGGCAACCAATTTTGCGGGCAAGCGATTATTGAGACAAAAGCTCAAGCTTTGAAGGTTACAGAAGAAGTGGAAAGACTTGTTTCCGTAACCCGTCCAGTACGTATGCACTGGACTGGTTGTCCCAACACGTGTGGGCAAGTACAAGTTGCGGATATAGGGTTCATGGGATGCATGACTAAGGACGAAAACGGAAAGACTGTTGAAGGGGTTGATGTTTACTTGGGGGGTAGAATTGGTAGTGACTCACATTTGGGAGATATTTATAAGAAGGGTGTGCCATGTAAGGACTTGGTGCCCTTCGTAGTGGATATAATGATTGAGAAATTTGGTGCCGTTCGAAGAGGAGAAGGAGAGGAGTGA	1776	44.99	MSAFHVKFLTPNSFLNPVTGIISSTRLYANPSQTTVPAAPAAQAPKEIAAERLEPRVEKRDGYYILKEKFRDGINPQEKVKVNGEPMKLFMENGIEELAKIPFEELDKSKDSKDDVDVRLKWLGLFHRRKHQYGRFMMRLKLPNGVTTSAQTRYLASVIKQYGEHGCADITTRQNWQIRGVTLPDAPAIIKGLKEVGLTSIQSGMDNVRNAVGNPLAGIDPHEIVDTRPYLDVLQQFITANSQGNPEFTNLPRKWNVCVIGSHDLYEHPHINDLAYMPATKNGQFGFNLLVGGFFSAKRCAEAIPLDAWVPEEDVVPVCGAILEAFRDLGFRGNRQKCRMMWLIDELGVEGFRSEVVKRMPQQALERASSEDLIDHKWERRDYFGVHPQKQEGLSFVGIHIPVGRLEADDMDQLARLADAYGSGELRLTVEQNIIIPNIENSKVEALLNEPLLKEKFLPEPPILMKGLVACTGNQFCGQAIIETKAQALKVTEEVERLVSVTRPVRMHWTGCPNTCGQVQVADIGFMGCMTKDENGKTVEGVDVYLGGRIGSDSHLGDIYKKGVPCKDLVPFVVDIMIEKFGAVRRGEGEE	591

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Hetu48g00972	591	Gene3D	Sulfite Reductase Hemoprotein, domain 1	462	591	IPR045854	-
	Hetu48g00972	591	SUPERFAMILY	Nitrite and sulphite reductase 4Fe-4S domain-like	205	363	IPR045854	-
	Hetu48g00972	591	Pfam	Nitrite-Sulfite reductase ferredoxin-like half domain	129	196	IPR005117	GO:0016491(InterPro)
	Hetu48g00972	591	Pfam	Nitrite-Sulfite reductase ferredoxin-like half domain	387	451	IPR005117	GO:0016491(InterPro)
	Hetu48g00972	591	SUPERFAMILY	Nitrite and sulphite reductase 4Fe-4S domain-like	466	577	IPR045854	-
	Hetu48g00972	591	Gene3D	Sulfite Reductase Hemoprotein, domain 1	197	382	IPR045854	-
	Hetu48g00972	591	PRINTS	Sirohaem Fe-binding site signature	466	484	IPR006066	GO:0016491(InterPro)\|GO:0020037(InterPro)\|GO:0051536(InterPro)
	Hetu48g00972	591	PRINTS	Sirohaem Fe-binding site signature	510	528	IPR006066	GO:0016491(InterPro)\|GO:0020037(InterPro)\|GO:0051536(InterPro)
	Hetu48g00972	591	Gene3D	-	73	454	-	-
	Hetu48g00972	591	SUPERFAMILY	Nitrite-Sulfite reductase N-terminal domain-like	53	204	IPR036136	GO:0016491(InterPro)
	Hetu48g00972	591	ProSitePatterns	Nitrite and sulfite reductases iron-sulfur-siroheme-binding site.	510	526	IPR006066	GO:0016491(InterPro)\|GO:0020037(InterPro)\|GO:0051536(InterPro)
	Hetu48g00972	591	PANTHER	FERREDOXIN--NITRITE REDUCTASE, CHLOROPLASTIC	36	588	IPR051329	-
	Hetu48g00972	591	SUPERFAMILY	Nitrite-Sulfite reductase N-terminal domain-like	341	477	IPR036136	GO:0016491(InterPro)
	Hetu48g00972	591	Pfam	Nitrite and sulphite reductase 4Fe-4S domain	205	363	IPR006067	GO:0016491(InterPro)\|GO:0020037(InterPro)\|GO:0051536(InterPro)
	Hetu48g00972	591	Pfam	Nitrite and sulphite reductase 4Fe-4S domain	468	579	IPR006067	GO:0016491(InterPro)\|GO:0020037(InterPro)\|GO:0051536(InterPro)

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Hetu48g00972	K00366	ferredoxin-nitrite reductase [EC:1.7.7.1]

Event-related genes

Select	Gene_1	Gene_2	Event_name
	314403	Hetu46g01107	Hetu48g00972
	405260	Hetu10g00085	Hetu48g00972
	406261	Hetu11g00052	Hetu48g00972
	407296	Hetu12g00053	Hetu48g00972

Duplication type information

Select	Gene1	Location1	Gene2	Location2	Duplicated-type
	Hetu	Hetu-Chr10:3162372	Hetu48g00972	Hetu-Chr48:52751907	wgd
	Hetu	Hetu-Chr10:3162372	Hetu48g00972	Hetu-Chr48:52751907	wgd
	Hetu	Hetu-Chr11:2398519	Hetu48g00972	Hetu-Chr48:52751907	wgd
	Hetu	Hetu-Chr12:2689430	Hetu48g00972	Hetu-Chr48:52751907	wgd
	Hetu	Hetu-Chr46:56516191	Hetu48g00972	Hetu-Chr48:52751907	wgd
	Hetu	Hetu-Chr47:60979182	Hetu48g00972	Hetu-Chr48:52751907	wgd