Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Hetu50g03508 | ATGTGCGGAATCGCCCTAATCATCTCCGGTTTTCGTGTCGATTCATCGCATACTCTTCCAGATGCAACCGATTATTGTTATTCACCTCATTCTCAACAATCGGAAACTACATTGTTTTCTGTAGATGATTTCAAAGCAGCTCTGAGGAAAAGAGGCCCTGATAGTTTAGGAAGCAAGTCTATATCACTTCATGTTCACGATGGAAGGATTATTCGATCTTCAGTGGAGGAAGAAGAACCAACTATATTATCCAACTCAAACGTTGATATTGATTTGAATGATGGTTTAGTTGGAAATTTTTTATTTGTTGGTGCTACATTGCAATTAAGAGGAGTACATCCAATCACACAACCTTTGGTGGACAAATCTGGGAGTATTCTTGTCTATAATGGTGAAGTGTTTGGAGGAATTGAGATCAGTAACGATAGCAATGATGCTGAAGTTCTCATTGAGTCCTTAAGTAAATGCTGCAACTGCCTTTCTCGTCAACATGACGCTGCATGTTCTTCTGGGAAGTACTCTGTTCCTGAATTTCTTTCGAAAATCAAGGGGCCTTGGGCTTTAATCTACTGGCAGGAGAGCTCAAAGACAATATGGTTTGGTAGAGATGCACTTGGAAGGCGAAGTCTTCTAATTCATCGGCCAAATATAAAAGACTCCCGACTCATGCTTTCTTCTGTATCGCCACCTTACGCTCTTCATGCCGTTACAGATTTTGGATCTGAAAATGGACCTGGTGAACCAAGCTTTTGGGAAGAGCTTCCATGTGGAGTTTACAGCTTGTCCATGAATGCTTCAAAACTGGATGGAAATTGGGCGTGTGAAGTTAAAAGACATGATTGGCTTGATCCGTTGCTGCAAGAACTGATTAAGTGGGATAGATCTCTCGTGGAACCCACACCTGATGTTTTAAGTGATGTTCATAAAACGTGTTCTAATGAGCAAGAGCAATGGGCGAAATTGCATCAGGAAGTTCTCTCTGCGCTTAAAGAATCTGTGAGACGACGCACAATATTTTCAGGAGTCCACCAGGGCAATTCTCCAGTGGCTGTACTTTTTTCTGGTGGCTTAGATTCGATGATTCTTGCAGCATTGCTGGATCAGTGCTTAGATCCAAAATATGAAATTGATTTGTTGAATGTGAGTTTTGATGGTCAGTTAGCTCCTGACAGAATCTCTGCTAGGGCAGGTGTGAACGAGCTTAGAAAAATTGCCCCCTTGAGAAGATGGAATCTGGTAGAGATCGATGCAGAATTGTCAAAATTGACTCTGGAGACGCCACATGTCATGTCGCTTATCAATCCCTCGAATACATACATGGACCTTAATATTGGAATCGCCTTGTGGTTGGCAGCTGGCGGTGATGGGTGGGTGAGTGAAGAAATTGGGACGGATAGTAATAACCATTCAGAATGCCAGCGTATTAAGTACAAGTCTGAATCCAGAATTTTGTTGGTCGGTTCTGGTGCAGATGAGCAATGTGCTGGTTACGGCCGCCATAAAACTAAGTACAAAAAAAGCAGTTGGGCTGGGCTAAATGAAGAAATGAAATTAGATATGCAGAGAATATGGAAGAGGAACCTAGGTAGAGATGATAGATGCATTGCTGATAACGGCAAAGAGGCAAGATTTCCTTTTCTAGATGAGGATGTAATAAGGCTACTGCTCGATATTCCACTATGGGAAATTGCAGACCTTCGCCAACCAAGTGGAGTTGGCGATAAAAAAATATTGCGTGAGGTTGCAAGAATGCTTCACTTGCAAGAAGCAGCTGTTCTACCTAAAAGAGCTATACAGTTCGGTTCTAGAATCGCTAGGGAATCAAACCGCAAGAATTTTGGAAGTAATCGGGCTGCAAATCAAGCTTCTGCTGGAAGTGCACTCTTTCACCCGCTCTAA | 1899 | 42.34 | MCGIALIISGFRVDSSHTLPDATDYCYSPHSQQSETTLFSVDDFKAALRKRGPDSLGSKSISLHVHDGRIIRSSVEEEEPTILSNSNVDIDLNDGLVGNFLFVGATLQLRGVHPITQPLVDKSGSILVYNGEVFGGIEISNDSNDAEVLIESLSKCCNCLSRQHDAACSSGKYSVPEFLSKIKGPWALIYWQESSKTIWFGRDALGRRSLLIHRPNIKDSRLMLSSVSPPYALHAVTDFGSENGPGEPSFWEELPCGVYSLSMNASKLDGNWACEVKRHDWLDPLLQELIKWDRSLVEPTPDVLSDVHKTCSNEQEQWAKLHQEVLSALKESVRRRTIFSGVHQGNSPVAVLFSGGLDSMILAALLDQCLDPKYEIDLLNVSFDGQLAPDRISARAGVNELRKIAPLRRWNLVEIDAELSKLTLETPHVMSLINPSNTYMDLNIGIALWLAAGGDGWVSEEIGTDSNNHSECQRIKYKSESRILLVGSGADEQCAGYGRHKTKYKKSSWAGLNEEMKLDMQRIWKRNLGRDDRCIADNGKEARFPFLDEDVIRLLLDIPLWEIADLRQPSGVGDKKILREVARMLHLQEAAVLPKRAIQFGSRIARESNRKNFGSNRAANQASAGSALFHPL | 632 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Hetu50g03508 | 632 | PANTHER | ASPARAGINE SYNTHETASE DOMAIN-CONTAINING PROTEIN 1 | 1 | 629 | IPR051857 | - | |
| Hetu50g03508 | 632 | CDD | Asn-Synthase-B-C | 327 | 601 | IPR001962 | GO:0004066(InterPro)|GO:0006529(InterPro) | |
| Hetu50g03508 | 632 | Pfam | Asparagine synthase | 506 | 585 | IPR001962 | GO:0004066(InterPro)|GO:0006529(InterPro) | |
| Hetu50g03508 | 632 | Pfam | Asparagine synthase | 325 | 396 | IPR001962 | GO:0004066(InterPro)|GO:0006529(InterPro) | |
| Hetu50g03508 | 632 | SUPERFAMILY | N-terminal nucleophile aminohydrolases (Ntn hydrolases) | 44 | 250 | IPR029055 | - | |
| Hetu50g03508 | 632 | Pfam | Glutamine amidotransferase domain | 116 | 226 | IPR017932 | - | |
| Hetu50g03508 | 632 | Gene3D | HUPs | 308 | 627 | IPR014729 | - | |
| Hetu50g03508 | 632 | ProSiteProfiles | Glutamine amidotransferase type 2 domain profile. | 2 | 254 | IPR017932 | - | |
| Hetu50g03508 | 632 | SUPERFAMILY | Adenine nucleotide alpha hydrolases-like | 319 | 625 | - | - | |
| Hetu50g03508 | 632 | Gene3D | Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 | 27 | 250 | IPR029055 | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Hetu50g03508 | K01953 | asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4] |
| Select | Gene_1 | Gene_2 | Event_name |
|---|---|---|---|
| 317356 | Hetu49g03821 | Hetu50g03508 | |
| 318004 | Hetu50g03508 | Hetu51g03882 |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Hetu | Hetu-Chr11:214441626 | Hetu50g03508 | Hetu-Chr50:205775090 | dispersed | |
| Hetu | Hetu-Chr25:162369877 | Hetu50g03508 | Hetu-Chr50:205775090 | dispersed | |
| Hetu | Hetu-Chr27:172955074 | Hetu50g03508 | Hetu-Chr50:205775090 | dispersed | |
| Hetu | Hetu-Chr47:109472021 | Hetu50g03508 | Hetu-Chr50:205775090 | dispersed | |
| Hetu | Hetu-Chr50:205775090 | Hetu51g03882 | Hetu-Chr51:227108248 | dispersed | |
| Hetu | Hetu-Chr49:220938911 | Hetu50g03508 | Hetu-Chr50:205775090 | wgd | |
| Hetu | Hetu-Chr50:205775090 | Hetu51g03881 | Hetu-Chr51:227091504 | wgd |