Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Laca3g02828 | ATGGAATCGCAAAACGACTTCGATCGGCTTCTCTTTTTTGAGCATGCTCGCCGGAGTGCCGAAGTTACTTATGCAAAAAATCCTCTCGATACAGAGAATCTAACCAGATGGGGAGGTTCGTTGCTTGAATTGTCGACCTTCCAGAGTGTTCAGGAATCAAAAGTCATGATTAAAGATGCTATATCTAAATTGGATGAAGCATTATCGATTGATCCAAGGAAACATGATGCGTTGTGGTATATGGGCAATGCACAAACTTCTTACGCCTTTCTTACTCCTGATAAAGATGAAGCGAAAAGCTATTTTGATTCAGCTTACACTTACTTTCAGAAGGCTGTTGATGAGGATCCAGGGAATGAACTTTACCTCAAATCATTTGAAGTAGCTACAAAGGCTCCTGAATTACACTCAGAGCTTCATAGTCAAAGCCTTAGTCAACAAGCCATGGCATTAGGGTCTGGAGGAGGCCCTTCAAGTTCTTCAAGTGTTAGGGGTCCGAAGGCACAAAAAAGCAATGATTTGAAATATGATATATTTGGATGGGTTATTCTTGCGGTTAGTATTGTGGCTTGGGTTGGGTTTGCTAAAGCAAATGTACCTCCACCGCCTCCTCGATGA | 618 | 42.07 | MESQNDFDRLLFFEHARRSAEVTYAKNPLDTENLTRWGGSLLELSTFQSVQESKVMIKDAISKLDEALSIDPRKHDALWYMGNAQTSYAFLTPDKDEAKSYFDSAYTYFQKAVDEDPGNELYLKSFEVATKAPELHSELHSQSLSQQAMALGSGGGPSSSSSVRGPKAQKSNDLKYDIFGWVILAVSIVAWVGFAKANVPPPPPR | 205 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Laca3g02828 | 205 | MobiDBLite | consensus disorder prediction | 146 | 168 | - | - | |
| Laca3g02828 | 205 | SUPERFAMILY | TPR-like | 13 | 124 | IPR011990 | GO:0005515(InterPro) | |
| Laca3g02828 | 205 | Pfam | Plant specific mitochondrial import receptor subunit TOM20 | 7 | 196 | - | - | |
| Laca3g02828 | 205 | Gene3D | Tetratricopeptide repeat domain | 1 | 150 | IPR011990 | GO:0005515(InterPro) | |
| Laca3g02828 | 205 | PANTHER | MITOCHONDRIAL IMPORT RECEPTOR SUBUNIT TOM20-1-RELATED | 1 | 204 | IPR010547 | GO:0005742(InterPro)|GO:0045040(InterPro) |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Laca3g02828 | - | - |
| Select | Gene_1 | Gene_2 | Event_name |
|---|---|---|---|
| 114601 | Laca2g02434 | Laca3g02828 |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Laca | Laca-Chr3:118806606 | Laca4g00067 | Laca-Chr4:2970773 | dispersed | |
| Laca | Laca-Chr2:99186589 | Laca3g02828 | Laca-Chr3:118806606 | transposed | |
| Laca | Laca-Chr2:127798806 | Laca3g02828 | Laca-Chr3:118806606 | wgd | |
| Laca | Laca-Chr3:26313251 | Laca3g02828 | Laca-Chr3:118806606 | wgd |