Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Laca3g02878 | ATGGCTTGCAAGACGGCGGTGCAGTTCTCCGACGTGCCACTTCTCGATCAGGTCAATGACAACGCCGCCTCGTTGTCCCTTTACGCCACCCGTCTCCCCACCGGATTGGATGTGAGTAATAACCGGAAAAGTTTGCCGAAATTCATGGTGGTTGGTCATAGAGGTCATGGCATGAACGTCTTGCTTTCGACTGATAAGAGAATGAATGCTTTTAAAGAGAATTCGATTCTTTCGTTCAATAACGCTGCAAATCATCCTCTTGATTTCATCGAATTCGACGTTCAGGTGACAAAAGACGACATACCAATCATTTTCCACGACAATTTCATCCTCTCTGAAGAGAATGGTATCGTAGTTGAGAAGAGGGTCACTGATTTGACAGTTGATGAGTTCTTTAGCTATGGTCCTCAAAGAATTGCAGGTGTCGTGGGTAAAACTTTGCTTAGAGAATCCCATGGACAGATAGTCGGGTGGAATGTTGAAACCGATGATCATTCTTGCACTTTACAAGAAGCTTTCGAAAAAGTGGTATACGAATACGCGCAAGAAAGACCTGTAATGTTCTCAAGCTTCCAACCCGATGTGGCCTTGATCATGAAGAAACTTCAAACTAAATACCCAGTTTACTTCTTGACAAACGGAGGAACCGAGATATTCGATGATGTTCGAATGAATTCGTTGGAAGAAGCCAAGAAGCTTGCAATCAATGGTGGATTGGATGGAATCGTTTCCGAAGTAAAGGGTATTTTCAGAAATCCTTCGGTCGTAAGAGAAATCAAAGAATCAAATCTTTCTCTCTTGACTTACGGAAAATTGAATAATGTTCCTGAAGCTGTTCATGTTCAATATCTAATGGGCGTTGAGGGTGTGATTGTCGATTTAGTTCAAGAAATCACAACTTCGGTTGCAAATATAAAGGCGACAAAAGCATACAGCGAGAGCGAAAAGAAGAAGAAGCTGCTAATCGAAGGGGAGGAAGGCGAATTACAGGTGACGGAGATCACCGACAAGATTGAATTGGCATTCTTATTAAACTTGATTTCACAAGTGATTCAACATTGA | 1062 | 42.18 | MACKTAVQFSDVPLLDQVNDNAASLSLYATRLPTGLDVSNNRKSLPKFMVVGHRGHGMNVLLSTDKRMNAFKENSILSFNNAANHPLDFIEFDVQVTKDDIPIIFHDNFILSEENGIVVEKRVTDLTVDEFFSYGPQRIAGVVGKTLLRESHGQIVGWNVETDDHSCTLQEAFEKVVYEYAQERPVMFSSFQPDVALIMKKLQTKYPVYFLTNGGTEIFDDVRMNSLEEAKKLAINGGLDGIVSEVKGIFRNPSVVREIKESNLSLLTYGKLNNVPEAVHVQYLMGVEGVIVDLVQEITTSVANIKATKAYSESEKKKKLLIEGEEGELQVTEITDKIELAFLLNLISQVIQH | 353 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Laca3g02878 | 353 | ProSiteProfiles | GP-PDE domain profile. | 48 | 302 | IPR030395 | GO:0006629(InterPro)|GO:0008081(InterPro) | |
| Laca3g02878 | 353 | Pfam | Glycerophosphoryl diester phosphodiesterase family | 53 | 295 | IPR030395 | GO:0006629(InterPro)|GO:0008081(InterPro) | |
| Laca3g02878 | 353 | Gene3D | Phosphatidylinositol (PI) phosphodiesterase | 37 | 302 | IPR017946 | GO:0006629(InterPro)|GO:0008081(InterPro) | |
| Laca3g02878 | 353 | SUPERFAMILY | PLC-like phosphodiesterases | 46 | 296 | IPR017946 | GO:0006629(InterPro)|GO:0008081(InterPro) | |
| Laca3g02878 | 353 | PANTHER | GLYCEROPHOSPHORYL DIESTER PHOSPHODIESTERASE | 175 | 308 | IPR051578 | GO:0046475(PANTHER) |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Laca3g02878 | - | - |
| Select | Gene_1 | Gene_2 | Event_name |
|---|---|---|---|
| 114604 | Laca2g02451 | Laca3g02878 |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Laca | Laca-Chr2:128202578 | Laca3g02878 | Laca-Chr3:122146584 | dispersed | |
| Laca | Laca-Chr3:27674489 | Laca3g02878 | Laca-Chr3:122146584 | wgd |