Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Laca3g02888 | ATGGAGGAAACGACGACGCCGGATGGTTCCATCGTAGATGAATCGGAGATAGAGTATGTGAGCTATGCCGGCGAGCATCACTTGCCCCTTATCATGCGCCTCGTTGATGAAGAACTCAGCGAACCCTATTCCATCTTCACCTATCGTTACTTCGTTTATCTCTGGCCCAATCTCTCCTTCCTCGCGTTCCATAAGGGGAAATGCATCGGAACAGTGGTTTCTAAAATGGGAGAACACCGTAATACTTTCAGAGGCTACATTGCTATGCTCGTTGTCCTCAAACCTTATCGTCACAGAGGAATTGCTACAGAACTTGTTACAAGATCCATAAAAGTGATGATGGAATCAGGTTGTGAAGAGGTAACATTGGAAGCTGAAGTGACAAATAAGGGTGCGCTTGCATTATATGGGCGTCTGGGGTTTATAAGAGCAAAAAGGCTATTTAGATACTATTTGAATGGTGTTGATGCATTTAGATTGAAGTTGCTATTTCCACATCAAGAATTACCATCTTCCCACCCCTACCCCCACTCCAACACTGTAATGTCATCGGTTCTTGAGAGTTATGCAGCTCATGAACTTGGTCCATGA | 591 | 44.5 | MEETTTPDGSIVDESEIEYVSYAGEHHLPLIMRLVDEELSEPYSIFTYRYFVYLWPNLSFLAFHKGKCIGTVVSKMGEHRNTFRGYIAMLVVLKPYRHRGIATELVTRSIKVMMESGCEEVTLEAEVTNKGALALYGRLGFIRAKRLFRYYLNGVDAFRLKLLFPHQELPSSHPYPHSNTVMSSVLESYAAHELGP | 196 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Laca3g02888 | 196 | SUPERFAMILY | Acyl-CoA N-acyltransferases (Nat) | 22 | 165 | IPR016181 | - | |
| Laca3g02888 | 196 | CDD | NAT-SF | 59 | 124 | - | - | |
| Laca3g02888 | 196 | Pfam | Acetyltransferase (GNAT) family | 31 | 141 | IPR000182 | GO:0016747(InterPro) | |
| Laca3g02888 | 196 | Gene3D | - | 20 | 179 | - | - | |
| Laca3g02888 | 196 | PANTHER | N-ALPHA-ACETYLTRANSFERASE 30 | 11 | 168 | IPR044542 | GO:0004596(PANTHER)|GO:0004596(InterPro)|GO:0017196(PANTHER)|GO:0017196(InterPro)|GO:0031417(PANTHER) | |
| Laca3g02888 | 196 | ProSiteProfiles | Gcn5-related N-acetyltransferase (GNAT) domain profile. | 17 | 165 | IPR000182 | GO:0016747(InterPro) | |
| Laca3g02888 | 196 | FunFam | N-alpha-acetyltransferase MAK3 isoform A | 24 | 175 | - | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Laca3g02888 | K00670 | N-alpha-acetyltransferase 30 [EC:2.3.1.256] |
| Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
|---|---|---|---|---|---|---|---|
| Laca | Acetyltransf_1 | 4.4e-16 | CL0257 | TR | GNAT |