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AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Laca7g02399 ATGGAAGCATACAGATTGTGCACTCAATTTCACAAATTAACTTCAATTCCATTCTCCGGTGATCAGCATTCTTCAATGGCGAATTATGGCATCCACGGCGATCTCCTTGAAGTCACAGTTGTTAGCTGCAATAAACTGAAAGATACAGAATGGATCTCGAGGCAAGATCCGTACGTTCATATCGAATACGGTAGCAATAAATCTTCCACCCGTACCTGTAAAGATGGAGGCAAAAACCCTACATTTCAAGAGAAATTCGTTTACAGTCTAGTTGAAGGATTAAGAGAGCTGAATGTTACAGTTTGGAATAGTAATACAATCAAACATGATGATTTCATCGGTAGTGGAAAGATTTCATTGGCAAAAGCTCTTTCTCAAGGATTTGATGATAGCAGCTGGCCATTACAAAGTAAAAATGGCAGGCATGCCGGAGAGGTTCGATTGATTATGCATTATTCCAATTCCGGTAAACCAGGAAAAGATATTGCTCAGAAACCATCAAAAGGTCTTGCTCCATCAGCACCACCGGCGTCCATGTACTCTGCACCTCCGCCGTCACTGTACTCTGCACCACCACCGCCGCATATGTACTCTGCACCACCACCGCCGTCTATGTACTCTGCACCACCACCTCCGGCAGCATCTTACCCTTCACAAGGCGAAGCCTACCCTCCACCAGGCGGAGCATACCCTCCACAAGGCGGAGCATACCCACCACCATCTCCTTACTCATCATACCCACCTAATTCAGGTGTTTATCCACCGGCTCCATACCCACCTCAGGCGGCTCCTTATCCTCCTCCGGCGTACTCATCAAATTCTGGTTATGGATCACATTATCCCCCTGGTTCTCCATTCCCAGGATTGTATCCACCACCACCATATTGA 888 46.51 MEAYRLCTQFHKLTSIPFSGDQHSSMANYGIHGDLLEVTVVSCNKLKDTEWISRQDPYVHIEYGSNKSSTRTCKDGGKNPTFQEKFVYSLVEGLRELNVTVWNSNTIKHDDFIGSGKISLAKALSQGFDDSSWPLQSKNGRHAGEVRLIMHYSNSGKPGKDIAQKPSKGLAPSAPPASMYSAPPPSLYSAPPPPHMYSAPPPPSMYSAPPPPAASYPSQGEAYPPPGGAYPPQGGAYPPPSPYSSYPPNSGVYPPAPYPPQAAPYPPPAYSSNSGYGSHYPPGSPFPGLYPPPPY 295
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Laca7g02399 295 MobiDBLite consensus disorder prediction 267 295 - -
Laca7g02399 295 Pfam C2 domain 36 126 IPR000008 -
Laca7g02399 295 MobiDBLite consensus disorder prediction 209 251 - -
Laca7g02399 295 Gene3D C2 domain 34 154 IPR035892 -
Laca7g02399 295 SMART C2-3c 35 132 IPR000008 -
Laca7g02399 295 CDD C2 36 133 - -
Laca7g02399 295 PANTHER CONSERVED SERINE PROLINE-RICH PROTEIN (AFU-ORTHOLOGUE AFUA-2G01790) 29 295 IPR052981 -
Laca7g02399 295 ProSiteProfiles C2 domain profile. 17 134 IPR000008 -
Laca7g02399 295 MobiDBLite consensus disorder prediction 153 185 - -
Laca7g02399 295 SUPERFAMILY C2 domain (Calcium-lipid-binding domain, CaLB) 29 154 IPR035892 -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Laca7g02399 - -
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Event-related genes

Select Gene_1 Gene_2 Event_name
116363 Laca7g02399 Laca9g03522
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Laca Laca-Chr7:114499109 Laca9g03522 Laca-Chr9:146730011 wgd