Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Laca7g02399 | ATGGAAGCATACAGATTGTGCACTCAATTTCACAAATTAACTTCAATTCCATTCTCCGGTGATCAGCATTCTTCAATGGCGAATTATGGCATCCACGGCGATCTCCTTGAAGTCACAGTTGTTAGCTGCAATAAACTGAAAGATACAGAATGGATCTCGAGGCAAGATCCGTACGTTCATATCGAATACGGTAGCAATAAATCTTCCACCCGTACCTGTAAAGATGGAGGCAAAAACCCTACATTTCAAGAGAAATTCGTTTACAGTCTAGTTGAAGGATTAAGAGAGCTGAATGTTACAGTTTGGAATAGTAATACAATCAAACATGATGATTTCATCGGTAGTGGAAAGATTTCATTGGCAAAAGCTCTTTCTCAAGGATTTGATGATAGCAGCTGGCCATTACAAAGTAAAAATGGCAGGCATGCCGGAGAGGTTCGATTGATTATGCATTATTCCAATTCCGGTAAACCAGGAAAAGATATTGCTCAGAAACCATCAAAAGGTCTTGCTCCATCAGCACCACCGGCGTCCATGTACTCTGCACCTCCGCCGTCACTGTACTCTGCACCACCACCGCCGCATATGTACTCTGCACCACCACCGCCGTCTATGTACTCTGCACCACCACCTCCGGCAGCATCTTACCCTTCACAAGGCGAAGCCTACCCTCCACCAGGCGGAGCATACCCTCCACAAGGCGGAGCATACCCACCACCATCTCCTTACTCATCATACCCACCTAATTCAGGTGTTTATCCACCGGCTCCATACCCACCTCAGGCGGCTCCTTATCCTCCTCCGGCGTACTCATCAAATTCTGGTTATGGATCACATTATCCCCCTGGTTCTCCATTCCCAGGATTGTATCCACCACCACCATATTGA | 888 | 46.51 | MEAYRLCTQFHKLTSIPFSGDQHSSMANYGIHGDLLEVTVVSCNKLKDTEWISRQDPYVHIEYGSNKSSTRTCKDGGKNPTFQEKFVYSLVEGLRELNVTVWNSNTIKHDDFIGSGKISLAKALSQGFDDSSWPLQSKNGRHAGEVRLIMHYSNSGKPGKDIAQKPSKGLAPSAPPASMYSAPPPSLYSAPPPPHMYSAPPPPSMYSAPPPPAASYPSQGEAYPPPGGAYPPQGGAYPPPSPYSSYPPNSGVYPPAPYPPQAAPYPPPAYSSNSGYGSHYPPGSPFPGLYPPPPY | 295 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Laca7g02399 | 295 | MobiDBLite | consensus disorder prediction | 267 | 295 | - | - | |
| Laca7g02399 | 295 | Pfam | C2 domain | 36 | 126 | IPR000008 | - | |
| Laca7g02399 | 295 | MobiDBLite | consensus disorder prediction | 209 | 251 | - | - | |
| Laca7g02399 | 295 | Gene3D | C2 domain | 34 | 154 | IPR035892 | - | |
| Laca7g02399 | 295 | SMART | C2-3c | 35 | 132 | IPR000008 | - | |
| Laca7g02399 | 295 | CDD | C2 | 36 | 133 | - | - | |
| Laca7g02399 | 295 | PANTHER | CONSERVED SERINE PROLINE-RICH PROTEIN (AFU-ORTHOLOGUE AFUA-2G01790) | 29 | 295 | IPR052981 | - | |
| Laca7g02399 | 295 | ProSiteProfiles | C2 domain profile. | 17 | 134 | IPR000008 | - | |
| Laca7g02399 | 295 | MobiDBLite | consensus disorder prediction | 153 | 185 | - | - | |
| Laca7g02399 | 295 | SUPERFAMILY | C2 domain (Calcium-lipid-binding domain, CaLB) | 29 | 154 | IPR035892 | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Laca7g02399 | - | - |
| Select | Gene_1 | Gene_2 | Event_name |
|---|---|---|---|
| 116363 | Laca7g02399 | Laca9g03522 |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Laca | Laca-Chr7:114499109 | Laca9g03522 | Laca-Chr9:146730011 | wgd |