Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Laca7g02413 | ATGGAGAGAATCAAATTTGGATGCAATGTGTTGTTATTCGCAACTTTCTTCGTCGCAGTTTTCGTGATCACTTACGCTGCTGCACTCAAGGAAGGACAAACCTGCGTAAATAATCAAAACTGTGACTCAGGGTTACATTGTGAGGCTTGCGTCGCTGACGGAAATGTTCGTCCTCGGTGTACTCGCGTTCAGCCTCTCAGTCCTTTCTCTAAGGCGAAAGGATTGCCATTCAATCGATACTCTTGGTTAACGACGCACAATTCGTTTGCTAGATTGGGAGAAACGTCAGTTACAGGCTCTGTTGTTCTAGCTCCGACGAATCAGCAGGATTCTATTAGTTCTCAGCTCGATAATGGTGTGAGAGGGTTGATGCTTGATATGTATGACTTTGAGAATGACATTTGGTTATGTCATTCCTTTGGTGGAAAATGCTTCAATTACACAGCTTTTCAACCTGCCATTAATGTTCTGAAAGAGATTCGAGAGTTCTTGGAAAAGAATCCTACTGAAATTGTGACTATAATCATTGAAGATTATGTTACCTCTCAAAATGGTCTAACTAATGTCTTCAACAATGCTGGTTTGAGAAAATTCTGGTTTCCAGTAGCTCAAATGCCTAGCAATGGTGGTGATTGGCCCACAGTTGACTTTATGGTCAAACAAAATTTCCGTTTAGTGGTTTTCACTTCCAAATCTTCTAAAGAACGTACAGAAGGAATTGCATATCAATGGAAATACATGGTTGAGAATCAATATGGAACAGATGGGATGAAAAGTGGCTTATGCCCTAATCGAGCAGAATCCCCTACCATGAACACTACATCAAGGTCACTTGTTTTAATGAACTATTTTCCTGATACACCCGATTTTACCCAAGCTTGCAAAGAAAATTCAGCCCCATTAATAAACATGATGAACACATGCCATGATCTAGACCATAAAAGGTGGCCTAATTTCATTGCTGTTGACTTCTACAAGAGGAGCAATGGCGGGGGTGCACCTGCGGCAGTAGATATGGCTAACGGGCAGTTAGTTTGTGGTTGTAACAGTATTTCAGCATGCAGGCCAAATATGACATTTGGAGCGTGTAATATCCCGGAGGCGGAGGTTGCTCCGGTCACAACTAAAGGAGGGAAAAGCACGGCGGTCAAGGCTGGTCAACCGTGGCTGTTTCTTACAGGTTTGGTGGTGTTGACTTTGATTTTGTCTTTGTCTTTGTAA | 1221 | 42.26 | MERIKFGCNVLLFATFFVAVFVITYAAALKEGQTCVNNQNCDSGLHCEACVADGNVRPRCTRVQPLSPFSKAKGLPFNRYSWLTTHNSFARLGETSVTGSVVLAPTNQQDSISSQLDNGVRGLMLDMYDFENDIWLCHSFGGKCFNYTAFQPAINVLKEIREFLEKNPTEIVTIIIEDYVTSQNGLTNVFNNAGLRKFWFPVAQMPSNGGDWPTVDFMVKQNFRLVVFTSKSSKERTEGIAYQWKYMVENQYGTDGMKSGLCPNRAESPTMNTTSRSLVLMNYFPDTPDFTQACKENSAPLINMMNTCHDLDHKRWPNFIAVDFYKRSNGGGAPAAVDMANGQLVCGCNSISACRPNMTFGACNIPEAEVAPVTTKGGKSTAVKAGQPWLFLTGLVVLTLILSLSL | 406 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Laca7g02413 | 406 | PANTHER | UNCHARACTERIZED | 38 | 354 | IPR051057 | GO:0008081(PANTHER) | |
| Laca7g02413 | 406 | ProSiteProfiles | Phosphatidylinositol-specific phospholipase X-box domain profile. | 76 | 182 | - | - | |
| Laca7g02413 | 406 | CDD | PI-PLCc-At5g67130-like | 67 | 341 | - | - | |
| Laca7g02413 | 406 | Gene3D | Phosphatidylinositol (PI) phosphodiesterase | 68 | 333 | IPR017946 | GO:0006629(InterPro)|GO:0008081(InterPro) | |
| Laca7g02413 | 406 | SMART | plcx-3 | 71 | 228 | IPR000909 | - | |
| Laca7g02413 | 406 | SUPERFAMILY | PLC-like phosphodiesterases | 74 | 345 | IPR017946 | GO:0006629(InterPro)|GO:0008081(InterPro) |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Laca7g02413 | - | - |
| Select | Gene_1 | Gene_2 | Event_name |
|---|---|---|---|
| 115913 | Laca5g03231 | Laca7g02413 |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Laca | Laca-Chr4:254779468 | Laca7g02413 | Laca-Chr7:114956560 | transposed | |
| Laca | Laca-Chr5:196689805 | Laca7g02413 | Laca-Chr7:114956560 | wgd |