AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Laca7g02413 ATGGAGAGAATCAAATTTGGATGCAATGTGTTGTTATTCGCAACTTTCTTCGTCGCAGTTTTCGTGATCACTTACGCTGCTGCACTCAAGGAAGGACAAACCTGCGTAAATAATCAAAACTGTGACTCAGGGTTACATTGTGAGGCTTGCGTCGCTGACGGAAATGTTCGTCCTCGGTGTACTCGCGTTCAGCCTCTCAGTCCTTTCTCTAAGGCGAAAGGATTGCCATTCAATCGATACTCTTGGTTAACGACGCACAATTCGTTTGCTAGATTGGGAGAAACGTCAGTTACAGGCTCTGTTGTTCTAGCTCCGACGAATCAGCAGGATTCTATTAGTTCTCAGCTCGATAATGGTGTGAGAGGGTTGATGCTTGATATGTATGACTTTGAGAATGACATTTGGTTATGTCATTCCTTTGGTGGAAAATGCTTCAATTACACAGCTTTTCAACCTGCCATTAATGTTCTGAAAGAGATTCGAGAGTTCTTGGAAAAGAATCCTACTGAAATTGTGACTATAATCATTGAAGATTATGTTACCTCTCAAAATGGTCTAACTAATGTCTTCAACAATGCTGGTTTGAGAAAATTCTGGTTTCCAGTAGCTCAAATGCCTAGCAATGGTGGTGATTGGCCCACAGTTGACTTTATGGTCAAACAAAATTTCCGTTTAGTGGTTTTCACTTCCAAATCTTCTAAAGAACGTACAGAAGGAATTGCATATCAATGGAAATACATGGTTGAGAATCAATATGGAACAGATGGGATGAAAAGTGGCTTATGCCCTAATCGAGCAGAATCCCCTACCATGAACACTACATCAAGGTCACTTGTTTTAATGAACTATTTTCCTGATACACCCGATTTTACCCAAGCTTGCAAAGAAAATTCAGCCCCATTAATAAACATGATGAACACATGCCATGATCTAGACCATAAAAGGTGGCCTAATTTCATTGCTGTTGACTTCTACAAGAGGAGCAATGGCGGGGGTGCACCTGCGGCAGTAGATATGGCTAACGGGCAGTTAGTTTGTGGTTGTAACAGTATTTCAGCATGCAGGCCAAATATGACATTTGGAGCGTGTAATATCCCGGAGGCGGAGGTTGCTCCGGTCACAACTAAAGGAGGGAAAAGCACGGCGGTCAAGGCTGGTCAACCGTGGCTGTTTCTTACAGGTTTGGTGGTGTTGACTTTGATTTTGTCTTTGTCTTTGTAA 1221 42.26 MERIKFGCNVLLFATFFVAVFVITYAAALKEGQTCVNNQNCDSGLHCEACVADGNVRPRCTRVQPLSPFSKAKGLPFNRYSWLTTHNSFARLGETSVTGSVVLAPTNQQDSISSQLDNGVRGLMLDMYDFENDIWLCHSFGGKCFNYTAFQPAINVLKEIREFLEKNPTEIVTIIIEDYVTSQNGLTNVFNNAGLRKFWFPVAQMPSNGGDWPTVDFMVKQNFRLVVFTSKSSKERTEGIAYQWKYMVENQYGTDGMKSGLCPNRAESPTMNTTSRSLVLMNYFPDTPDFTQACKENSAPLINMMNTCHDLDHKRWPNFIAVDFYKRSNGGGAPAAVDMANGQLVCGCNSISACRPNMTFGACNIPEAEVAPVTTKGGKSTAVKAGQPWLFLTGLVVLTLILSLSL 406
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Laca7g02413 406 PANTHER UNCHARACTERIZED 38 354 IPR051057 GO:0008081(PANTHER)
Laca7g02413 406 ProSiteProfiles Phosphatidylinositol-specific phospholipase X-box domain profile. 76 182 - -
Laca7g02413 406 CDD PI-PLCc-At5g67130-like 67 341 - -
Laca7g02413 406 Gene3D Phosphatidylinositol (PI) phosphodiesterase 68 333 IPR017946 GO:0006629(InterPro)|GO:0008081(InterPro)
Laca7g02413 406 SMART plcx-3 71 228 IPR000909 -
Laca7g02413 406 SUPERFAMILY PLC-like phosphodiesterases 74 345 IPR017946 GO:0006629(InterPro)|GO:0008081(InterPro)
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Laca7g02413 - -
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Event-related genes

Select Gene_1 Gene_2 Event_name
115913 Laca5g03231 Laca7g02413
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Laca Laca-Chr4:254779468 Laca7g02413 Laca-Chr7:114956560 transposed
Laca Laca-Chr5:196689805 Laca7g02413 Laca-Chr7:114956560 wgd