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AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Laca7g02418 ATGAGTTCATTTATCAACTTCAGAAACTTCGTTGACACATCGCAACCAGAGATGAATGGAATCAGACAAATGGCACCAAATTCACCATTAACCCGACAATCTTCAATCTATTCCTTAACTTTCGATGAGCTACAGAACACATTAGGTGGAGGTGGGAAGGATTTCGGATCGATGAACATGGATGAACTTTTGAAGAACATTTGGACTGCGGAAGAGACTCAATCAATGGCGTCGACTTCTAATTTTGGAATCCCGAATAACGGTAACGGGAATATACAAAGACAAGGATCGTTGACGTTACCAAGAACACTTAGCCAGAAAACCGTCGATGAAGTCTGGCGAGAGTTGATGAAGAGTAACGGCGGAGGAAAAGGCGGCGATTTAATCGGAGAAATTAATTTACAGGCGGAGCAACGGGAACCCACTTTAGGGGAGATGACATTAGAGGATTTCTTACTGAAAGCAGGCGTCGTAACTGAAAATAACCAAATTCAATCGAATGAAGGGTCTATGAGACCTCAGAACCCTCAAAACAGCTCGTATTTTGGTGATGTTTCACAGAATGTCGAAAACAATAGCTTCATGTTCGGGTTTCAAAACCCGAATCAAAACCAGGGATTTCAACAGCAAATCACAGAGAATAAAAATGGAGTCAACCTGCAACCAAAACCAAATCAAAATCAAAAACCACAGCCTCAGCCTCAGCCTCAGTCGCAGCCGCAGCCTCTTTTCCCGAAGCAAGCGGCGTTGGACTTCACGGCGCCATTGAATGGTAAATCTGAAAACCCGATGAAGATTAATGTGGTTCAAGCTAATGGGGTCGAGAACGGAGTGATGAACATGAAGAAACTTGGGGGTCCTGGTGCAGGATCTCCACGTAATTTGATCCCAAAAACTAACGTCGATTCAACTCCATCACCTCCCTTTTATGCTTTTGATGAAGGTGGTTTTCGTGGGCGGAGAAGCAGCGGTACCTTAGAGAAAGTGGTGGAGAGACGGCGGAGGAGAATGATCAAAAATCGAGAATCTGCTGCAAGATCTAGGGCTCGAAAGCAGGCGTATACTTTGGAATTGGAAGCAGAAGTTGCAAAACTTAAAGAATTAAACCACGAATTAATGAAAAAGCAGGAAGAAATCACGGAGATGCAGAGGAATCAGATAGTGGAGAAGATGAAGCTGCCATGGGGGAGTAAGAGGCTGTGCTTACGAAGAACATTAACAGGGCCTTGGTAG 1233 44.2 MSSFINFRNFVDTSQPEMNGIRQMAPNSPLTRQSSIYSLTFDELQNTLGGGGKDFGSMNMDELLKNIWTAEETQSMASTSNFGIPNNGNGNIQRQGSLTLPRTLSQKTVDEVWRELMKSNGGGKGGDLIGEINLQAEQREPTLGEMTLEDFLLKAGVVTENNQIQSNEGSMRPQNPQNSSYFGDVSQNVENNSFMFGFQNPNQNQGFQQQITENKNGVNLQPKPNQNQKPQPQPQPQSQPQPLFPKQAALDFTAPLNGKSENPMKINVVQANGVENGVMNMKKLGGPGAGSPRNLIPKTNVDSTPSPPFYAFDEGGFRGRRSSGTLEKVVERRRRRMIKNRESAARSRARKQAYTLELEAEVAKLKELNHELMKKQEEITEMQRNQIVEKMKLPWGSKRLCLRRTLTGPW 410
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Laca7g02418 410 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 335 350 IPR004827 GO:0003700(InterPro)|GO:0006355(InterPro)
Laca7g02418 410 SMART brlzneu 328 392 IPR004827 GO:0003700(InterPro)|GO:0006355(InterPro)
Laca7g02418 410 MobiDBLite consensus disorder prediction 164 185 - -
Laca7g02418 410 CDD bZIP-plant-BZIP46 337 386 - -
Laca7g02418 410 PANTHER CAMP-RESPONSE ELEMENT BINDING PROTEIN-RELATED 32 408 IPR043452 GO:0003700(InterPro)|GO:0005634(PANTHER)|GO:0045893(InterPro)
Laca7g02418 410 Coils Coil 351 385 - -
Laca7g02418 410 SUPERFAMILY Leucine zipper domain 332 381 IPR046347 GO:0003700(InterPro)|GO:0006355(InterPro)
Laca7g02418 410 Gene3D - 330 386 - -
Laca7g02418 410 FunFam BZIP transcription factor 330 384 - -
Laca7g02418 410 Pfam bZIP transcription factor 332 383 IPR004827 GO:0003700(InterPro)|GO:0006355(InterPro)
Laca7g02418 410 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 330 381 IPR004827 GO:0003700(InterPro)|GO:0006355(InterPro)
Laca7g02418 410 MobiDBLite consensus disorder prediction 227 241 - -
Laca7g02418 410 MobiDBLite consensus disorder prediction 216 243 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Laca7g02418 K14432 ABA responsive element binding factor
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Event-related genes

Select Gene_1 Gene_2 Event_name
116365 Laca7g02418 Laca9g03508
116366 Laca7g02418 Laca9g03509
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Laca Laca-Chr4:182115886 Laca7g02418 Laca-Chr7:115125214 dispersed
Laca Laca-Chr7:115125214 Laca9g03509 Laca-Chr9:146149642 dispersed
Laca Laca-Chr5:217468032 Laca7g02418 Laca-Chr7:115125214 transposed
Laca Laca-Chr7:103200736 Laca7g02418 Laca-Chr7:115125214 transposed
Laca Laca-Chr1:16900010 Laca7g02418 Laca-Chr7:115125214 wgd
Laca Laca-Chr7:115125214 Laca9g03508 Laca-Chr9:146100847 wgd
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Gene Family Members

Select Gene Event_type S_start S_end Function Ath_gene Identity(%) E-value Score
Lacanog00669 . 37 124 Basic region leucine zipper (bZIP) Transcription Factor gene family AT1G75390 40.909 5.22e-17 71.2
Lacanog01011 . 35 302 Basic region leucine zipper (bZIP) Transcription Factor gene family AT4G36730 52.649 4.50e-79 243.0
Lacanog01222 . 1 155 Basic region leucine zipper (bZIP) Transcription Factor gene family AT2G16770 57.962 2.26e-54 170.0
Lacanog01556 . 7 164 Basic region leucine zipper (bZIP) Transcription Factor gene family AT1G75390 53.086 1.39e-48 157.0
Lacanog01669 . 130 320 Basic region leucine zipper (bZIP) Transcription Factor gene family AT5G06960 30.052 1.84e-18 80.9
Lacanog01673 . 12 109 Basic region leucine zipper (bZIP) Transcription Factor gene family AT3G62420 60.204 3.11e-35 117.0
Lacanog02128 . 1 155 Basic region leucine zipper (bZIP) Transcription Factor gene family AT2G16770 57.962 2.26e-54 170.0
Lacanog02290 . 21 333 Basic region leucine zipper (bZIP) Transcription Factor gene family AT1G06070 69.301 5.27e-149 427.0
Lacanog03851 . 1 170 Basic region leucine zipper (bZIP) Transcription Factor gene family AT4G35040 66.667 2.44e-74 222.0
Lacanog03982 . 52 281 Basic region leucine zipper (bZIP) Transcription Factor gene family AT1G19490 34.711 3.70e-20 87.8
Lacanog04284 . 44 137 Basic region leucine zipper (bZIP) Transcription Factor gene family AT3G56850 43.103 9.66e-18 75.1
Lacanog05639 . 1 303 Basic region leucine zipper (bZIP) Transcription Factor gene family AT4G36730 56.433 1.00e-111 326.0
Lacanog05965 . 41 300 Basic region leucine zipper (bZIP) Transcription Factor gene family AT3G58120 35.273 1.72e-27 109.0
Lacanog06206 . 2 317 Basic region leucine zipper (bZIP) Transcription Factor gene family AT3G58120 49.555 4.40e-89 267.0
Laca1g00203 ACH 3 337 Basic region leucine zipper (bZIP) Transcription Factor gene family AT1G43700 46.418 9.22e-77 239.0
Laca1g00641 ACH 21 416 Basic region leucine zipper (bZIP) Transcription Factor gene family AT1G45249 53.202 1.22e-113 336.0
Laca1g02406 . 56 339 Basic region leucine zipper (bZIP) Transcription Factor gene family AT1G06070 61.111 1.37e-109 326.0
Laca1g02485 . 121 317 Basic region leucine zipper (bZIP) Transcription Factor gene family AT5G06950 28.571 5.18e-19 83.2
Laca1g02486 . 121 313 Basic region leucine zipper (bZIP) Transcription Factor gene family AT5G06950 27.917 4.23e-16 75.1
Laca1g02488 . 121 318 Basic region leucine zipper (bZIP) Transcription Factor gene family AT5G06950 30.0 4.74e-22 91.7
Laca1g03368 . 7 164 Basic region leucine zipper (bZIP) Transcription Factor gene family AT1G75390 52.469 4.59e-50 157.0
Laca2g00017 . 43 218 Basic region leucine zipper (bZIP) Transcription Factor gene family AT1G42990 39.326 2.16e-18 81.6
Laca2g00555 . 139 469 Basic region leucine zipper (bZIP) Transcription Factor gene family AT1G19490 36.812 1.03e-35 136.0
Laca2g00771 . 1 330 Basic region leucine zipper (bZIP) Transcription Factor gene family AT3G12250 67.868 1.16e-148 422.0
Laca2g00856 . 27 330 Basic region leucine zipper (bZIP) Transcription Factor gene family AT1G06070 68.506 2.13e-137 395.0
Laca2g00902 . 220 431 Basic region leucine zipper (bZIP) Transcription Factor gene family AT4G38900 45.283 1.79e-35 135.0
Laca2g02093 ACH 24 214 Basic region leucine zipper (bZIP) Transcription Factor gene family AT2G22850 35.751 5.67e-28 103.0
Laca2g02783 . 213 303 Basic region leucine zipper (bZIP) Transcription Factor gene family AT3G58120 38.462 4.32e-13 66.6
Laca2g03393 ACH 1 366 Basic region leucine zipper (bZIP) Transcription Factor gene family AT2G40620 56.041 1.88e-110 324.0
Laca3g00558 . 29 372 Basic region leucine zipper (bZIP) Transcription Factor gene family AT2G35530 60.969 4.59e-125 369.0
Laca3g01384 ACH 1 517 Basic region leucine zipper (bZIP) Transcription Factor gene family AT4G38900 48.785 3.17e-130 386.0
Laca3g01452 ACH 1 256 Basic region leucine zipper (bZIP) Transcription Factor gene family AT4G35040 56.154 5.06e-89 264.0
Laca3g01794 . 4 370 Basic region leucine zipper (bZIP) Transcription Factor gene family AT1G68640 52.475 3.08e-116 345.0
Laca3g02183 . 17 121 Basic region leucine zipper (bZIP) Transcription Factor gene family AT2G18160 43.75 3.51e-23 87.0
Laca3g02347 ACH 46 218 Basic region leucine zipper (bZIP) Transcription Factor gene family AT2G22850 40.113 1.91e-26 99.0
Laca3g02453 . 40 167 Basic region leucine zipper (bZIP) Transcription Factor gene family AT3G30530 57.778 1.19e-44 144.0
Laca3g02457 ACH 15 167 Basic region leucine zipper (bZIP) Transcription Factor gene family AT3G30530 54.321 8.45e-47 149.0
Laca3g02913 . 67 165 Basic region leucine zipper (bZIP) Transcription Factor gene family AT1G13600 64.0 1.19e-36 123.0
Laca3g03558 ACH 12 382 Basic region leucine zipper (bZIP) Transcription Factor gene family AT2G46270 50.26 1.36e-102 305.0
Laca4g00554 . 54 167 Basic region leucine zipper (bZIP) Transcription Factor gene family AT3G30530 65.217 3.12e-43 140.0
Laca4g00762 . 1 157 Basic region leucine zipper (bZIP) Transcription Factor gene family AT2G16770 35.802 6.55e-24 91.7
Laca4g00893 ACH 5 382 Basic region leucine zipper (bZIP) Transcription Factor gene family AT2G46270 45.885 1.19e-91 277.0
Laca4g03331 ACH 9 163 Basic region leucine zipper (bZIP) Transcription Factor gene family AT1G75390 49.375 5.05e-43 139.0
Laca4g03511 ACH 38 158 Basic region leucine zipper (bZIP) Transcription Factor gene family AT1G45249 64.228 2.12e-37 129.0
Laca4g03537 . 271 431 Basic region leucine zipper (bZIP) Transcription Factor gene family AT4G38900 56.977 1.02e-45 167.0
Laca4g04036 . 62 285 Basic region leucine zipper (bZIP) Transcription Factor gene family AT4G35900 37.698 2.63e-32 119.0
Laca4g04410 ACH 60 152 Basic region leucine zipper (bZIP) Transcription Factor gene family AT3G49760 46.237 1.50e-20 82.0
Laca4g04723 ACH 52 167 Basic region leucine zipper (bZIP) Transcription Factor gene family AT3G30530 68.966 8.44e-50 159.0
Laca5g00671 ACH 10 165 Basic region leucine zipper (bZIP) Transcription Factor gene family AT1G75390 52.795 1.52e-45 145.0
Laca5g01222 . 235 431 Basic region leucine zipper (bZIP) Transcription Factor gene family AT4G38900 61.616 3.39e-62 206.0
Laca5g01407 . 62 277 Basic region leucine zipper (bZIP) Transcription Factor gene family AT5G24800 53.153 1.83e-66 208.0
Laca5g01490 . 1 389 Basic region leucine zipper (bZIP) Transcription Factor gene family AT2G35530 58.088 2.78e-135 390.0
Laca5g01519 . 1 330 Basic region leucine zipper (bZIP) Transcription Factor gene family AT3G12250 75.0 7.23e-176 488.0
Laca5g01630 . 121 318 Basic region leucine zipper (bZIP) Transcription Factor gene family AT5G06950 28.814 3.12e-19 84.3
Laca5g03106 ACH 7 164 Basic region leucine zipper (bZIP) Transcription Factor gene family AT1G75390 54.321 1.22e-51 161.0
Laca5g03521 . 171 300 Basic region leucine zipper (bZIP) Transcription Factor gene family AT3G58120 46.923 2.85e-27 105.0
Laca5g03851 . 6 297 Basic region leucine zipper (bZIP) Transcription Factor gene family AT3G56850 52.215 2.31e-93 277.0
Laca5g03927 . 1 330 Basic region leucine zipper (bZIP) Transcription Factor gene family AT3G12250 59.76 1.70e-121 355.0
Laca5g03965 . 29 720 Basic region leucine zipper (bZIP) Transcription Factor gene family AT2G40950 48.844 1.26e-168 499.0
Laca6g00610 . 1 152 Basic region leucine zipper (bZIP) Transcription Factor gene family AT5G11260 73.203 9.36e-61 184.0
Laca6g01083 . 1 481 Basic region leucine zipper (bZIP) Transcription Factor gene family AT1G08320 60.728 0.0 583.0
Laca6g02673 ACH 3 337 Basic region leucine zipper (bZIP) Transcription Factor gene family AT1G43700 48.711 2.19e-89 270.0
Laca6g02879 . 47 152 Basic region leucine zipper (bZIP) Transcription Factor gene family AT3G49760 42.202 2.15e-18 74.7
Laca6g03100 . 7 164 Basic region leucine zipper (bZIP) Transcription Factor gene family AT1G75390 52.469 2.41e-48 154.0
Laca7g00051 ACH 1 382 Basic region leucine zipper (bZIP) Transcription Factor gene family AT2G46270 47.291 4.34e-99 295.0
Laca7g00707 . 118 318 Basic region leucine zipper (bZIP) Transcription Factor gene family AT5G06960 25.571 1.73e-13 66.6
Laca7g02159 . 120 313 Basic region leucine zipper (bZIP) Transcription Factor gene family AT5G44080 45.192 1.83e-37 132.0
Laca7g02418 ACH 22 392 Basic region leucine zipper (bZIP) Transcription Factor gene family AT1G49720 50.374 1.14e-93 285.0
Laca7g02551 ACH 18 164 Basic region leucine zipper (bZIP) Transcription Factor gene family AT1G75390 40.132 5.93e-23 86.7
Laca7g02866 . 1 306 Basic region leucine zipper (bZIP) Transcription Factor gene family AT3G58120 56.0 1.72e-100 297.0
Laca7g03117 . 44 134 Basic region leucine zipper (bZIP) Transcription Factor gene family AT3G56850 44.545 1.87e-19 79.7
Laca8g01980 ACH 16 297 Basic region leucine zipper (bZIP) Transcription Factor gene family AT3G56850 57.191 5.43e-98 288.0
Laca8g03429 . 1 265 Basic region leucine zipper (bZIP) Transcription Factor gene family AT5G28770 41.379 1.20e-66 215.0
Laca8g03605 ACH 1 228 Basic region leucine zipper (bZIP) Transcription Factor gene family AT4G35040 65.126 7.64e-106 306.0
Laca8g03737 ACH 1 553 Basic region leucine zipper (bZIP) Transcription Factor gene family AT4G38900 56.837 0.0 534.0
Laca8g03952 . 1 307 Basic region leucine zipper (bZIP) Transcription Factor gene family AT3G58120 52.454 5.69e-96 285.0
Laca8g04249 . 235 446 Basic region leucine zipper (bZIP) Transcription Factor gene family AT4G38900 59.624 7.83e-64 213.0
Laca9g00601 . 37 119 Basic region leucine zipper (bZIP) Transcription Factor gene family AT5G07160 32.53 6.72e-06 43.1
Laca9g00670 . 1 441 Basic region leucine zipper (bZIP) Transcription Factor gene family AT2G36270 48.941 7.80e-109 326.0
Laca9g00865 . 23 416 Basic region leucine zipper (bZIP) Transcription Factor gene family AT5G06839 58.296 1.83e-170 487.0
Laca9g00976 ACH 16 297 Basic region leucine zipper (bZIP) Transcription Factor gene family AT3G56850 52.812 9.52e-91 271.0
Laca9g01248 . 7 315 Basic region leucine zipper (bZIP) Transcription Factor gene family AT5G44080 44.277 5.97e-56 181.0
Laca9g01465 . 59 285 Basic region leucine zipper (bZIP) Transcription Factor gene family AT4G35900 29.515 8.29e-16 71.6
Laca9g02051 ACH 26 367 Basic region leucine zipper (bZIP) Transcription Factor gene family AT2G40620 57.341 2.57e-113 331.0
Laca9g02579 . 80 165 Basic region leucine zipper (bZIP) Transcription Factor gene family AT3G30530 43.333 3.37e-15 66.6
Laca9g03211 . 114 316 Basic region leucine zipper (bZIP) Transcription Factor gene family AT3G12250 25.0 5.20e-14 69.3
Laca9g03442 ACH 9 164 Basic region leucine zipper (bZIP) Transcription Factor gene family AT1G75390 48.428 1.51e-42 137.0
Laca9g03508 ACH 1 431 Basic region leucine zipper (bZIP) Transcription Factor gene family AT3G19290 37.844 4.57e-73 231.0
Laca9g03509 ACH 22 392 Basic region leucine zipper (bZIP) Transcription Factor gene family AT1G49720 40.625 3.52e-66 212.0
Laca9g03742 . 211 300 Basic region leucine zipper (bZIP) Transcription Factor gene family AT3G58120 52.222 3.65e-23 96.7
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Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
Laca bZIP_1 2.2e-12 CL0018 TF bZIP