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AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Laca7g02419 ATGACAAGCTCAAAACAACACCCTAAGCTTCTGTCCAAACAACTCTCATGGTCTCCGGACATCCACCGCGACATAGAATGGCAGAAGCTTAAGATCAAACAGCTACGTCGTTTCCGCCACCGCCGCTGCAAGAGCATCGACGCTACTCCTGAAGTTGACGTCACTGATGATGATTTGAAGGAGCTTAAAGCGTGCTTTGATTTAGGTTTCGGTTTTGATTTCTCTAGCGATTTGGATCCGAAACTCTCGCAAGCTTTTCCCGCTCTAGAATTGTACGCCGCCGTTAACCGGCAGTACAATCGCAGACTACTGTCAAGGTCTTCGTCGTTAAGTTCTGATTCATCTTCAACCTCATCAACCCCCATCTCCACACTTATCGATCCAAGCGATGATCCGGAAAAGATGAAGACGAAATTGAAACAGTGGGCGCAAGTGGTTTCGTGTTCTGTTCATGAAGCTTCTTCACAATCACAAATCACAACCAGTGACAAACATAATTAA 501 45.91 MTSSKQHPKLLSKQLSWSPDIHRDIEWQKLKIKQLRRFRHRRCKSIDATPEVDVTDDDLKELKACFDLGFGFDFSSDLDPKLSQAFPALELYAAVNRQYNRRLLSRSSSLSSDSSSTSSTPISTLIDPSDDPEKMKTKLKQWAQVVSCSVHEASSQSQITTSDKHN 166
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Laca7g02419 166 PANTHER OSJNBA0071G03.3 PROTEIN 7 151 - -
Laca7g02419 166 MobiDBLite consensus disorder prediction 106 126 - -
Laca7g02419 166 Pfam Protein of unknown function (DUF1685) 54 112 IPR012881 -
Laca7g02419 166 MobiDBLite consensus disorder prediction 106 137 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Laca7g02419 - -
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Laca Laca-Chr7:115139619 Laca4g04548 Laca-Chr4:256628387 transposed